jgi.p|Nanoce1779_2|578972, gene_2080 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|578972
Unique Namegene_2080
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:740957..743855 -

Link to JBrowse

Properties
Property NameValue
TranscriptId579058
ProteinId578972
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:740957..743855 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578972mRNA_2080-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578972mRNA_2080Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|578972

>mRNA_2080-protein ID=mRNA_2080-protein|Name=jgi.p|Nanoce1779_2|578972|organism=Nannochloropsis oceanica|type=polypeptide|length=616bp
MSPAGAGHGGGDDGSRKERDGGLRVKELRSQHSLRHKLQKWRGTQWMSRG
AGEINLDESQSLSLLDVRGRIRACGAGLWQRRSPMCMGFSFIFLAVTIMM
CVLLVDVLRLIPCMNPNSPCFNLALAEFQNICSFERMPVRLTTTAMLPHI
YSRLHVKSAVIDVALRGDHGPGHVATSSFTEKDALSSMVLKGGEQNLTVN
SIMVVTNTTGLAIMFAYLLNEIDFQVAITAKIQVVVQTPLRVRIKAPINS
NFFLTCGHLPCKESVCKYICQFGNYPLKDPDPGNPYPYVTRVEKVRLAYD
EEGEYIISPQVDVWLRDFKASASFPKSILDMYFYNSTKPGSISGFRERHD
LDEDHKLFRVTLHEFLLQSLESSGGKPFRMKMDLRLLNNTAGQAATARDF
TTRFLGKEPMYIYLAATPIDTTCPQLRNPLLMVPPAGLSLNTNLSTKDSS
DSSLSNMGALTDVFRVNSVDLFSLNNTILRSFANITLMLPFALEGELPAL
DMDGFAGPDLVGHFKAFPVTLPPVVPRQGFERDRAPAHTFGKEAMSLFAP
KGEATVVLFTEAELSQWGIEKLETIFPNVLSQLEELDIDLVGSRPAEPGN
VMQTFLNGVVIKLASL
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Synonyms
Publications