jgi.p|Nanoce1779_2|628184, gene_2019 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|628184
Unique Namegene_2019
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:576232..578156 +

Link to JBrowse

Properties
Property NameValue
TranscriptId628270
ProteinId628184
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:576232..578156 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0001517N-acetylglucosamine 6-O-sulfotransferase activity
GO:0001537N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0004394heparan sulfate 2-O-sulfotransferase activity
GO:0016232HNK-1 sulfotransferase activity
GO:0017095heparan sulfate 6-O-sulfotransferase activity
GO:0018721trans-9R,10R-dihydrodiolphenanthrene sulfotransferase activity
GO:00187221-phenanthrol sulfotransferase activity
GO:00187233-phenanthrol sulfotransferase activity
GO:00187244-phenanthrol sulfotransferase activity
GO:0018725trans-3,4-dihydrodiolphenanthrene sulfotransferase activity
GO:00187269-phenanthrol sulfotransferase activity
GO:00187272-phenanthrol sulfotransferase activity
GO:0019111phenanthrol sulfotransferase activity
GO:0050694galactose 3-O-sulfotransferase activity
GO:0050698proteoglycan sulfotransferase activity
GO:0051922cholesterol sulfotransferase activity
GO:0008146sulfotransferase activity
Homology
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628184mRNA_2019-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628184mRNA_2019Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|628184

>mRNA_2019-protein ID=mRNA_2019-protein|Name=jgi.p|Nanoce1779_2|628184|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MLCKMPTREQLREKMYASPNVTSKIMFLVLIGVAATVQFLLPMSVAATLH
NIYLSHGTKINQTRRSINLESERGIRPCPSYIIIGAQKCGTTSLYEYLCQ
HPLVLRANRRETHYLDRRWRREEGLTWREHRDTYHKFFNKTFPDENSSRI
IGESSPSYMLYSDVVVPRVRELAPEAKMLVMLRCPVARAYSQFQMLIDTE
GEGTPEQKKARGTLWKGKSFEEVVEKELEELEACGVTPDMTYEEFKTRFL
ASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAA
QTQVGKVFAFLGLPPHDIIDTDAKNTRQYEQLDEKMQARLAAFYAPFNDK
LFEMLARPRGMAGWAGMKEEGGVRNGQVLSVDEAKSEQLRTNVRTEQNMR
RKRE*
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Synonyms
Publications