jgi.p|Nanoce1779_2|578575, gene_1972 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|578575
Unique Namegene_1972
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:468676..470862 -

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Properties
Property NameValue
TranscriptId578661
ProteinId578575
Product nameGWT1-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:468676..470862 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01850NO04G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578575mRNA_1972-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578575mRNA_1972Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|578575

>mRNA_1972-protein ID=mRNA_1972-protein|Name=jgi.p|Nanoce1779_2|578575|organism=Nannochloropsis oceanica|type=polypeptide|length=521bp
MPMMDPTDYKAAKEAFVSNLNGTSLYEITLVTLPLPLALWAYTELRALRL
IYSKPTPGLLLAFCYEFTLLILPQVIAQCLPNATLWVLLVLFVIAVVCRA
IVQASREPALKSQWRHDRAVRLVSSHARNYLSNYRAGVMLTSSIAILAVD
FTIFPRRFGKTEAFGTSLMDLGVGCFIFSSGFCSRAARLFHHHSEAAPGA
AAAAGVSGVVITDDLYPQEGRKGGGHGGVSPPNSSSRFFRFSKRAAMWRT
SKRCLPLLLLGLGRILANRYVDYQEHVSEYGKRWNFFLTLAVIHLAATAL
HTVFPHKALFPLAIIVLVLYQMQLSAGGLTEYILEAPREGGFMRENREGV
CGVIGFLCLYLIGEQIGTWTVWTMGVVGGGTKTTEAEARRALLHLVVLDA
GLWLAAAATSSAVQPISRRLVNMSYVMWSAAYNVMVVTFLFAVDEFASMA
ATSRLLGAVNRNQLAFFICANLLTGAINLSIYTLYASPVVAWGVIGTYVL
VLMLAFVLVDRAFNVTLKFW*
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Synonyms
Publications