jgi.p|Nanoce1779_2|578302, gene_1884 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|578302
Unique Namegene_1884
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:264010..266998 +

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Properties
Property NameValue
TranscriptId578388
ProteinId578302
Product nameexonuclease
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:264010..266998 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0042578phosphoric ester hydrolase activity
GO:0043765T/G mismatch-specific endonuclease activity
GO:0003676nucleic acid binding
GO:0004527exonuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01040NO04G01040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578302mRNA_1884-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578302mRNA_1884Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|578302

>mRNA_1884-protein ID=mRNA_1884-protein|Name=jgi.p|Nanoce1779_2|578302|organism=Nannochloropsis oceanica|type=polypeptide|length=299bp
MSNWARLQAKFSTAENGRVQKRTAALTKEDASPAEGDFLSSQSNGRSAKG
IAGAARAPAQGKKRKRRDLSEAAAVAERARQEAKDKEDKLRSVESLADDV
TVVEKALYVGLDCEMVGVGDGGKRSALARVTMVNFDGRVIYDEHVRPRER
VTDFRTWVSGVKAKHLKAALELKDCIQQVAELVKGKIIVGHALKNDLQVL
MLQHPVAMIRDTARYRAYMRPRGREGGKLRPRKLKDLAEECLGMEIQGGK
HDSGEDARAAMLLYRAQRVEWEKEIRKMHKYTTAAAKKQKRKVGVQVT*
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Synonyms
Publications