jgi.p|Nanoce1779_2|624524, gene_1672 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|624524
Unique Namegene_1672
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1204263..1207696 -

Link to JBrowse

Properties
Property NameValue
TranscriptId624610
ProteinId624524
Product nameAlpha-1,3/1,6-mannosyltransferase ALG2
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1204263..1207696 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04670NO03G04670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624524mRNA_1672-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624524mRNA_1672Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|624524

>mRNA_1672-protein ID=mRNA_1672-protein|Name=jgi.p|Nanoce1779_2|624524|organism=Nannochloropsis oceanica|type=polypeptide|length=524bp
MDASPDPQDTLAREMQRKGLLRPLASSSSALPAIPPALHVAFLHLDLGIG
GAEQLVVNAAVALQQRGHRVTLWTTHHDPTHCFAETRGDGPLAPHVRVAG
DWLPRQILGRFRALCAVVRMLYLAFMVGLLTRMGELCWWHRRGNEDRKQQ
QQQLRHDHIDIVFCDGVSAMVPLLRFLWRFPVLFYCHFPDKLLCTDRASL
IKRCYRAPLDRIEESTTGAATLIAVNSHFTAQVFTEAFPSLPSRHGTPAV
IYPAINLKSFVPPKAAAAATTTITENAASRGNVANITRELRPFVSLNRFE
RKKNIGLALEALALVRTSLQHQAEDQKSNQENLLKELRLIIAGGYDDAVV
ENKEYMRELQSQAQQLDLSDCVSFQPSISDATRATLLQEALAVLYTPDRE
HFGIVPLEAMYAGSPVLAVASGGPLETVLHGKTGFLCEGTGKGFAEAMLR
LLRKPESRDEMGRVGHEYVKEKFGLDAFATTLEKAVLDTRTRAREGEQIW
RGGIIWVLVMVGMVMLAQALLYK*
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Synonyms
Publications