jgi.p|Nanoce1779_2|13552, gene_1662 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|13552
Unique Namegene_1662
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1187036..1188978 -

Link to JBrowse

Properties
Property NameValue
TranscriptId13638
ProteinId13552
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1187036..1188978 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04570NO03G04570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|13552mRNA_1662-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|13552mRNA_1662Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|13552

>mRNA_1662-protein ID=mRNA_1662-protein|Name=jgi.p|Nanoce1779_2|13552|organism=Nannochloropsis oceanica|type=polypeptide|length=582bp
MPQQHHLHMQHRRKPPPWPRRLALLIILLVVYLPTLLSAFLFHAPRRRRG
VLLLSARGKRPSSSPSPPTTQAPLQASRRSSSSGNTTTTSTSSRSNSSSY
RNNNNTGFKRQSSTSSKVPWPLPRLPSSIATTSTRSVSTAKSRWRPFSSS
ISPSSSCIGTRNSRQLSRSLLACSPGDVDAILTLVDANHNKLNPADCALA
LKIMVNRPQLSSTSSSTSVPYRQSSVKAGNVSLFPWLCLAEDIRFERFLL
RVQYLAPSLESGDLTRIIRTLPRLAFMGGGGGGGGGERGSVEGSNGASSD
TGSGQSAPQKMSLLLGALVGGLRRRMTEVLPSYSAQELALTVNALTKLPL
AQPRRSQQQPQQKGSHNDKLEMLFLKTVSERLDDCTPQGLALLLTGLPKL
FEQARIIDDSSSSRSNSGISAHLDGPFLLRFRDAVATQLLATPFLPQDLA
LLLNGFTNLGFNPGIEFLHLFSRQVQEVLPSCKPQGRSVHLSLPFFLPFF
LPSFSFLPSASFLPSFLPSFLSLFLPSTLFENARLNPPSFPTFFLSGACL
ECQRESLRATTLKTDPKANPLTFPSSFPPPP*
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Synonyms
Publications