jgi.p|Nanoce1779_2|572720, gene_1568 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|572720
Unique Namegene_1568
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:970236..972038 +

Link to JBrowse

Properties
Property NameValue
TranscriptId572806
ProteinId572720
Product namePyridoxal phosphate-dependent transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:970236..972038 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006569tryptophan catabolic process
GO:0009435NAD biosynthetic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0030429kynureninase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G03710NO03G03710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572720mRNA_1568-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572720mRNA_1568Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|572720

>mRNA_1568-protein ID=mRNA_1568-protein|Name=jgi.p|Nanoce1779_2|572720|organism=Nannochloropsis oceanica|type=polypeptide|length=503bp
MPSSTANSHEGETPAPYPRNTHAGSGRAFKSYEKNLATLQAELGNIDLAD
EKLAKALDERDLLASYRDHFIIPTDGKCIYLCTNSLGLQPKRLSENMREV
LAKWGQEGVTSWFRGDAPFATADDRVLDGLAALVGAKRYEVVAMNTLSVN
IHLMLAAFYHPSGQRRKIIVEEGAFPSDMHVLRSHLALGRQTKQQQQQQQ
QQEQDEEDLILIIPRRPGEATWHLSDIVAFLHENGQDASLLFLSGLHFAS
GQCFDMATITQAAHAQGMLVGYDLAHAIGNVKLQLHEWGVDFACWCHYKY
VCAGPGAVGGVYVHEKHTMAQDSLPRLAGWWGQVKHNRFTFNEPSFKPSP
GAMGFQLSTPSPLLLSCLSSSLSVFVAAGGIEPLRQKSILLTGYLHLLLE
HDLASQVQVVTPKAVEERGCQLSFTFRTEGVLAADVLKALEDQNVMADVR
MPNFIRVAPFPLYTRFVDVWRFVGILKEVLRRPHVGGQEEEQLQQENNNE
EG*
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Synonyms
Publications