jgi.p|Nanoce1779_2|572477, gene_1511 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|572477
Unique Namegene_1511
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:816619..817917 -

Link to JBrowse

Properties
Property NameValue
TranscriptId572563
ProteinId572477
Product name50S ribosomal protein L34
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:816619..817917 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572477mRNA_1511-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572477mRNA_1511Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|572477

>mRNA_1511-protein ID=mRNA_1511-protein|Name=jgi.p|Nanoce1779_2|572477|organism=Nannochloropsis oceanica|type=polypeptide|length=64bp
MVLEEEITTDSTGGEAMQLIKRTYQPSLLRRKRAHGFLSRLKNRDGRKIL
ARRRAKNRTRMAV*
back to top
Synonyms
Publications