jgi.p|Nanoce1779_2|667381, gene_1435 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667381
Unique Namegene_1435
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:542348..545347 -

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Properties
Property NameValue
TranscriptId667467
ProteinId667381
Product nameglycoside hydrolase, family 31
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:542348..545347 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL001ncniL001Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02480NO03G02480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667381mRNA_1435-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667381mRNA_1435Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667381

>mRNA_1435-protein ID=mRNA_1435-protein|Name=jgi.p|Nanoce1779_2|667381|organism=Nannochloropsis oceanica|type=polypeptide|length=840bp
MPLPAAPPSKKNNTLPSSKKNKTQHARPATVVLLAVTAALALQPPVAFRR
WWLDRNAVLELHPDCQTTENYALGAGFDVRWDRGSLSIWRSLPEASSLQK
HSLWHTYAKDKPFILAGRVVLDGDPIRDGHYFLKQRILQETNRQTVEALV
YEPYISLTLTGTIDSPGFPSVSYRFILTVDDASETGKLQFALLLGETAEA
DEDDGDEEMLYAAGGPHTNPLSPSSSGSYYNRIWLRYGSEKDEAFFGFGQ
HYSRWNLKGDLVPVLISEQGVGRGLQPLTFILNTFVHGVGSAWHTTYVAK
PMYMTSHGRALSLKGPKVSLFDLTLPDVVTVEYWSCKSVRGIVYSAASPL
DTITLFTSETGRMQPLPDWTQQGVIVGLEGGSDEVENVTATLLKYEVPLV
GVWLQDWVGTRQDWDGTRLIWNWEVNRQYYPRWDSYREGLKKEGGREGGV
KVLTYINPYLVDVVGDGASNKSFPHERNLFREAVENGYLIKNENGGPLIA
KSGSIEFGTIDPTNPETRAWLKKVIKTSLIDDAGSAGWMADFGEYVPFQA
RLEGGRGNVMHNVFPDYWASLQKEAIEEAGRGMEGGKAGREVVAFVRSGY
LKTPGVAQLYWVGDQLVTWDGHDGIKTVLPAMLSGGLVGNSLSHSDVGGY
TMIDHVLFKFFRPRELLFRWVEMGAFAGVMYRTHLGSFMHTPSAQVWDDE
ESVRFLGRFGRVFAHLAPYRKVLMEEAARDGWPVVRPLFCHFPGEKGVWK
VGQQFMVGPDLLVAPVVDPGKRTWRVYLPGEGREGGRERGLAVAWRHVWT
GQIYEKGGWVTVRAGLGEIPVFWRVGSRWEGLFEGLAVA*
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Synonyms
Publications