jgi.p|Nanoce1779_2|667261, gene_1287 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667261
Unique Namegene_1287
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:183217..187550 +

Link to JBrowse

Properties
Property NameValue
TranscriptId667347
ProteinId667261
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:183217..187550 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01140NO03G01140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667261mRNA_1287-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667261mRNA_1287Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667261

>mRNA_1287-protein ID=mRNA_1287-protein|Name=jgi.p|Nanoce1779_2|667261|organism=Nannochloropsis oceanica|type=polypeptide|length=1333bp
MGEKYIRTSLSFEHLIDDPGWMPYFLDFLSGHDQSHLLLFWLEVEVFELA
AGGGPSLVTQATRIYESYLGPDAPHRIELPPTMLTFLQAEVQTSAPNINV
FSAAHAFVFRRLRQTWYPAFLLSSTYQSLLEHLKYSYRTPLKEILIDEIQ
SRYIEAFLLNTDAKLGPVTVGNVYLWKKIHHDLRPLGIRLARDRLSGPAG
DAKNIEDLRLFIADAKAAYEAYIQPSPQTGIPGGPPLSTRVLPSGGKGKR
EGGRERGSTPSATALGPELRHRLAECLGRLVSQSRYYSGIGTGGIGQIDR
SIIGELTSHLIDAQRVILSWLEVEVYPSFRKSWLCGILAGDIQSRRSAPV
RRKKRLRTLFKSIRSFRHVYVPPCPRSEGRGLVLVSTEGVSKASVPLTHE
LVWGFDVAVFPIVPALRASDLRTDVEGREEEEVVREKVRGLRLDDEEEGD
WWGAVGGAILSTKNRDGDAGIFQLGESPKDAGKEQGQPLEQKRKTKRMLQ
FRSAIRSSQVMGLKKPMHSKRKREQKAEFAADEMGEERATNLCAAIEGEL
AKEIQRLAFPSLCLMPLERSTFVLFSPKLVVPEATLHHFVLPIVRKDIET
KAHVGEGAQDANKNRGSSSSSSPFLKSPRAAIRSPSGDGEVEPPDLTADD
VFHLYGACLIEWAPAGDEVLLPRCLALVSTEPRVASLRRAVLALRKTLGG
PGVGGSPITPDTPKKTPWQLEDEQQQQRQSKQHHTPALLDVDMFARRKGE
EEVMEEEEVEGEEDPAAYWSRACSKEGGASTSMALFSPKAASASNTFGAT
GGFLSPTAGGGLSMTDAASTISIPTSCSLPPPLVHSLPQHVDASFLPLFQ
ALSPETFLKAFTATLLERPIIMKSSSRSLTMLASEGLRRLIYPFAWLQPY
QPLLPVGGICNFWDNIRKKAGGTTWFDYAFEENGLDDSLVGGRGERASYA
EPMTMSSSGRQVPGFLVGLETCIVEAALTATKVVSPAYGDENGGGSSSGT
CHAWACANCDVHDGGHFAGDGGFDMDSPFSPGRSSPLSTRSTPRTTRECS
SSKFRGSSGLGGSAAGGGGAGKNSSTTKYGELPSCVRASARELLAHSYIV
DLDKDSMIEPRRGNYSTTALPSLPEAAASALLTSLQRIFNPSVAPPTAVG
GEVGLYQGYGYRTVCAARAAGAAAVAAPASVAKDGVGRNRKLTRDGRHGG
GARSSLGASPDSQKRELGNVGGNEGDGNEQLHGAFVMFFRQVLLDRYREY
TISYLEEQMVAFHADSFFASQPEPSHGFWTDLFQTRLFAHFLVVEHQRVA
ASFEEPALQRPPGADQSEETTTTTTTVECVDV*
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Synonyms
Publications