jgi.p|Nanoce1779_2|571588, gene_1278 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|571588
Unique Namegene_1278
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:168411..171153 -

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Properties
Property NameValue
TranscriptId571674
ProteinId571588
Product namePeptidase family C50-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:168411..171153 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO:0003676nucleic acid binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01080NO03G01080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571588mRNA_1278-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571588mRNA_1278Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|571588

>mRNA_1278-protein ID=mRNA_1278-protein|Name=jgi.p|Nanoce1779_2|571588|organism=Nannochloropsis oceanica|type=polypeptide|length=854bp
MVDEGSEAPVLERAEAWLRLARLSSSQKKKEEMLEQAWVLAERSRCPRLM
RDAGRLSFVASTAARATLAVRAATAAPAEATEPSSVAKIGASASAVWRLV
NSVGIGFGNSLRLSSSGTRERLREVLPSTWTVVTLALSPVQDGEEGEKEG
GTGDLLIGRIEGGKGGRMMGARLGIAGEIRRLLDEFEKVMEGNSKSLHGR
SAEEVAGWGKREKAGWWKERERLDAQLGGIVRDLERTMGPWRWLMGGQVN
VKENGPVVGVVEAALLALGVDDKEEGGDGEQEDSLAVLLRAALVGIANVH
PMLSREEQREELYLVIKTVGLSVAVGQVDAALDCLAAAAAAALVTTASKT
IVSHQSVANVVTGKGKITATKKKTRPSSSSCSDGGGDAELETLCKDLSKL
TVAELKKELAARYLPTTGVKATLLARLEEDSSSSRVKPKQKNEDVDDDTV
EAARRDTPPTDSVDALFTSHCSSSSSSTSRPRASAGMKMDKGSRQQRCPL
LLVLDETLQRLPWESLPLLKGHPVSRCPSLEYIGATLHSHSCSCSSSSSS
SRSKTKTGPRGTSIAAAARRKKDEEDVPSISPASTTTSAITLGPDGTLQI
PRSPGFYVLDPEANLSTTKATLQPALAALHASHSFSSSSSKASKKEQQQW
EGLVGEAPSEDWLKSKLETSAVFIYCGHGSGEVFLAREDVAALPQVPLAI
LMGCSSGRLRLPGSSSSTCSSIVNRDGFGGCVNALMSPELFESSGMALSY
LAAGSPAVVGNLWDVTDRDIDRFCLALLEALFPIMRTGEQKQEEEDGGVL
LPEDVGGGKDDKALLLPAVARARSACKLPYLVGSAPVVYGLPCELIDKTT
DDV*
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Synonyms
Publications