jgi.p|Nanoce1779_2|616145, gene_12099 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|616145
Unique Namegene_12099
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_113:15361..18021 -

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Properties
Property NameValue
TranscriptId616231
ProteinId616145
Product name5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_113supercontigscaffold_113:15361..18021 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:00038715-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008652cellular amino acid biosynthetic process
GO:0009086methionine biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL002ncniL002Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G00280NO28G00280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|616145mRNA_12099-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|616145mRNA_12099Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|616145

>mRNA_12099-protein ID=mRNA_12099-protein|Name=jgi.p|Nanoce1779_2|616145|organism=Nannochloropsis oceanica|type=polypeptide|length=876bp
MEMRGTTTDKTRTTQRLEIATLGFSDLGGEHQLKHLLKDFWGGRSNEEEL
LQGARRVEEEGWALQAAAGIDAIGVGDFALYDWVLNWIEYLGCVPPRFLQ
HANANNLTAVERYFLMARGGDGGRSGGKGQHPATEDPPIVALEMHKWFDT
NTLYLMPEFDERLTPHANFQPLLDSLARAKTMLGVERAVPMLLGPITFVW
LGHLRPENQQQQTRFETMLAALIPLYQSLLDQIAHMDYPEVQFHEPALIT
EHGHTFLLPYFQSTYRILLQHAAGTGKGARQQLGQSSKRLGLRIDLVTYF
DEMHEAVYRAAIALPFAALSLDFTHRGEASAGYTIFLENFGFPTDMRLGL
GVLDGRSVWKPDPPMVLPDMAMLHQSVKHVRLQASCSLRYLPWSVKTETS
LQKAYPLVFPLLSFAEEKLGDLKSLAEATMGEDVKVLEEWKWTRLQRDTS
YDPPTSRTSRGAITARERSRNLQTNDFERSLAYNDRRQQQYCFKLGGVLP
TTVVGCLPSLGKTRQGTDPGEAEERVKAEIERVVQLQERAGVDLLAHGAY
NPGDMVEAIAARLEGMATTEHGWVRVYGSRCVRPPIVIGDMWRPKALTVD
GYKYAQSLTSKVVKGQLPGPTTLLQWSYPAVDRPRKEQILQLALCLRDEI
RDLEIAGAKVIEVEELGFREGLPLRGQKRVDYLAFMAEAFRLATSIAGPH
IEIHTHVAYTEVRDCIPALLDFDADAYLFENTRAHDTARRALKNAGFPRR
LGLGCFDVHSPVVPSVHDIQERLRAQIESFPPEQLLVVPDGPLRTRSWEE
VDAALKNMSAAAKGLREEWEESRMLKVPSLEQSMRSASLETKARSASFDL
RSEKAKPGGGGGKRGGGSVPSSPRA*
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Synonyms
Publications