jgi.p|Nanoce1779_2|615622, gene_11755 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|615622
Unique Namegene_11755
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_104:31453..38397 -

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Properties
Property NameValue
TranscriptId615708
ProteinId615622
Product namePeptidase family M41-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_104supercontigscaffold_104:31453..38397 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0004222metalloendopeptidase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL041ncniL041Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G03300NO14G03300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|615622mRNA_11755-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|615622mRNA_11755Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|615622

>mRNA_11755-protein ID=mRNA_11755-protein|Name=jgi.p|Nanoce1779_2|615622|organism=Nannochloropsis oceanica|type=polypeptide|length=667bp
MSSIGGAGVQGEGSGMWRDGGAAIGREDTVAQEMFDSPASSSSSSSSSYP
QRVNLPPPPTSANPFGGVFGSGGASAGPGGPPPGQVHAPYYFNIGSVDNF
ERKLETVQRDLNIPPRDFIPVQYVNETNYGAELMRFMPTLLVLGAWFVMM
RGMGSGGGGGGMSSVFRIGKSKAKKINKEQVNVTFKDVAGVDEAKREVME
FVEFLKNPKRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSI
SGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFS
GGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRADILDAALTRPGRFDR
QIQVDRPDIKGRSEIFQVHLKPVKVAGNLEEIANRMAALTPGFTGADIAN
ICNEAAIVAARRNKTSVDLNDFELATERIIAGLESHKLISPEEKRIVAYH
EAGHAVAGWNLEHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMD
MVCMTLAGRASEEIFFEKVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNL
AFPKQEGGFGMEQRAYSENTAQAMDEEAKKLVDEAYQRTLLLLNEKKVQI
KNIAELLLKKETINHDDIVTAIGPRPFVAHKEYAEFIESIKPMVRYVHPV
PSSLPPSLPFSISLCL*
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Synonyms
Publications