jgi.p|Nanoce1779_2|614909, gene_11742 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|614909
Unique Namegene_11742
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_93:32310..37786 -

Link to JBrowse

Properties
Property NameValue
TranscriptId614995
ProteinId614909
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_93supercontigscaffold_93:32310..37786 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL008ncniL008Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|614909mRNA_11742-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|614909mRNA_11742Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|614909

>mRNA_11742-protein ID=mRNA_11742-protein|Name=jgi.p|Nanoce1779_2|614909|organism=Nannochloropsis oceanica|type=polypeptide|length=1140bp
MVSSAVEGPANDAATAGGKQETSSSRFMKRSVVLGLVAGVLVLGAIFGGV
FGARAVEKKKRVPIPVEAVTYAMVTEGFAKGAVVPVPNTLNSAAAKATSK
ATTTATTTADKAPAGTGLGGEHSIFSYEYWFGEGGIGAISMFDPMPLILP
PDAVTVPTWTTAFPNGNFANTEGRVVCYAKTGQDVIDMVSGDESACEVII
LTNDRFTPYAIHTKMNVTKSKLLVGRPIYAPMLNATNRVERLFDILPGGR
LEARNVNMVRGFGRNLGRNGNEINLVVGSIARVQVGGQFTATACMFRERN
NTLPGFIDEIRRKIRTPTARNRQFGQLFLVLGGSLTLTVCRSLRFRPFGN
GILNAMVIGRDINVVAGMCTLIGHNTGSSSLWSVNYFIAGAIGLVMGGTL
TLVGGNNIGANLLQCQSGMMVNIGSIAGTLITIGYGYTTSKGFLFRNIIG
QFGAVAGVSIMVGFVRGSADCCKWVAGAGTTHATYTGINNRHAGAETGYA
VSSAFFGVGSSNYVGSGTNFYQAVPRIGTALTVSSNGAGLTSFVGAGTST
NSFTVQLSAQLVRFNAAAGSDLFQGAGWHTNINTTRFSFQLVNAFVGAGN
TIFLGFGGAAFIRTYSSSVRFLQWNPSTPFTWTVAGVGVRSSGAKGQNLI
LFKGGTTRYIFNKTSRTVTKISSPQVQKTPSPTSMRRRGLVRKRAVEAED
IAHVPTTMGSWLTSIVDAAGGFDPSIENKLVVLQSTIINRQWKTPPHPSK
FRGRKMMEHLGGYPRILFDGLIDLNGGESIETPGLVSSNNSACFLCNVGP
GNTADHVGGPDQCEIQDVCGSSRNPAEIYERAQNATTTNILPPHVDRSMG
KVDKDGNPIMANTWILWHELVVYCHSSDPETDDSSINSNCLSADYIKEVI
KGYILMDSNKNEYQITVSDGNVHAAADAFAMNDTTLDDLKMGVSPEWNQD
CQGWTKYDIRLLASDPEVEQHILDLMDGFVEDPSDLQATILENADPSADL
QPCGITIKELGEQRIPSLAKMPAFKPSTKFTLGPAMWISDGVSIEPVKFL
TPGETYTVYVQNFPKGTKIDLTLMEGVALTGPTVASIDSFDEDGISEVRW
TVPRDIMDGRKRYLKAAISNIPALFTFSQVFYVDSDNRM*
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Synonyms
Publications