jgi.p|Nanoce1779_2|614890, gene_11739 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|614890
Unique Namegene_11739
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_93:21481..27187 -

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Properties
Property NameValue
TranscriptId614976
ProteinId614890
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_93supercontigscaffold_93:21481..27187 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL008ncniL008Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05900NO01G05900Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|614890mRNA_11739-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|614890mRNA_11739Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|614890

>mRNA_11739-protein ID=mRNA_11739-protein|Name=jgi.p|Nanoce1779_2|614890|organism=Nannochloropsis oceanica|type=polypeptide|length=1140bp
MVSSAVEGPANDAATAGGKQETSSSRFMKRSVVLGLVAGVLVLGAIFGGI
FGARAVEKKKRVPIPVEAVTYAMVTEGFAKGAVVPVPNTLNSAAAKATSK
ATTTATTTADKAPAGTGLGGEHSIFSYEYWFGEGGIGAVPMFDPTPLILP
PDAVTVPTWTTAFPNGNFANTEGRVVCYAKTGQDVIDMVSGDESACEVII
LTNDRFTPYAISKTMNVTKSKLLVGRPIYAPMLNATNRVERLFDILPGGR
LETRNVNMVRGFGRNLGLNGNEINLVVGSIARVQVGGQFTATACMFRERN
NTLPSFIDEIRRKIRTPTARNRQFGQLILVLGGTITLTACRSIRFRPFGN
GILNAMVIGRDINVVAGMCTLIGHNTASASLWSVNYFIVGTLGLAMGGTL
TFVGGNNIGANLLQLQAGVMSNFGTLAGSLVTVGYGYTSVKGMLLRFVAG
QFGTVAGVSIMIGFIRGSADGCKCQGGAGATHATFTGVNNRHAGAETGYS
INGAFFGAGGTNYVASGTNFVQAVPRIGTYLTASSNGVGLASFIGAGTST
NSYTAQLSAQMMRFNAGVATDLFQGAGWHTNINATRFSIQLVNAFVGAGN
QLFVGFGGAAFIRTYSLSVRALQWNPSTPYTYTVAGVGTRSSGTRSQNLI
LFKGGTTRYIFNKTSRTVTKISSPQVQKTPSPTSMRRRGLVRKRAVEAED
IAHVPTTMGSWLTSIVDAAGGFDPSIENKLVVLQSTIINRQWKTPPHPSK
FRGRKMMEHLGGYPRILFDGLIDLNGGESIETPGLVSSNNSACFLCNVGP
GNTADHVGGPDQCEIQDVCGSSRNPAEIYERAQNATTTNILPPHVDRSMG
KVDKDGNPIMANTWILWHELVVYCHSSDPETDDSSINSNCLSADYIKEVI
KGYILMDSNKNEYQITVSDGNVHAAADAFAMNDTTLDDLKMGVSPEWNQD
CQGWTKYDIRLLASDPEVEQHILDLMDGFVEDPSDLQATILENADPSADL
QPCGITIKELGEQRIPSLAKMPAFKPSTKFTLGPAMWISDGVSIEPVKFL
TPGETYTVYVQNFPKGTKIDLTLMEGVALTGPTVASIDSFDEDGISEVRW
TVPRDIMDGRKRYLKAAISNIPALFTFSQVFYVDSDNRM*
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Synonyms
Publications