jgi.p|Nanoce1779_2|647353, gene_11722 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|647353
Unique Namegene_11722
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_111:4967..8694 +

Link to JBrowse

Properties
Property NameValue
TranscriptId647439
ProteinId647353
Product nameCarboxyl transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_111supercontigscaffold_111:4967..8694 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016874ligase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL090ncniL090Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G02220NO21G02220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|647353mRNA_11722-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|647353mRNA_11722Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|647353

>mRNA_11722-protein ID=mRNA_11722-protein|Name=jgi.p|Nanoce1779_2|647353|organism=Nannochloropsis oceanica|type=polypeptide|length=631bp
MVAWKVTLFTPEYVEGRQLVLIANDITIQAGSFGTREDTVFALASRHARA
HGLPRIYLAANSGARIGLADSVKAKFKVGWNKEDDPNGGFKYIYLTKEDY
TELASAVKAEMAVDPATGEERYVIKDIIGLPSEKDLGVENLKGSGTIAGE
TSLAYNDVFTLTLVVGRTVGIGAYLVRLGHRTIQKSTNSPIILTGFQALN
KLMGKAIYTSNDQLGGQMIMFPNGVSHTLVENHLEGIVAMLTWLSYVPSV
RRGFLPIQDITGVDVVERAISFTPQKGIAYDPRHLVGGMTNELDGTWVSG
FFDKNSFIETLAGWAKTVVVGRARLGGIPCGVIITETRTAEATTPADPAD
SSSQERNIQQAGGVWFPDSAYKTAQAIRDFNGEDLPLMIFSNWRGFSGGQ
RDMFDEVLKFGSMIVDALVAFAQPIFVYIPPHAELRGGAWVVVDPTIHSE
VMEMYAATEARGGVLEPNGAAEIKFREKDYVATAHRLDRQLQGMDARMRE
LEGKEGGKERDAEVKALQKEIKERENALKGVYAQVAVQFADLHDTPGRMA
AVGVIRQVVPWAQARSFFYWRLRRRLAEFHLRKEVFKAAGGKGGREGGMS
LLQASVLLKSWYVSTPGQGGLGMDGRASRY*
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Synonyms
Publications