jgi.p|Nanoce1779_2|570301, gene_11641 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|570301
Unique Namegene_11641
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_91:15673..21230 -

Link to JBrowse

Properties
Property NameValue
TranscriptId570387
ProteinId570301
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_91supercontigscaffold_91:15673..21230 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL007ncniL007Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G05240NO04G05240Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|570301mRNA_11641-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|570301mRNA_11641Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|570301

>mRNA_11641-protein ID=mRNA_11641-protein|Name=jgi.p|Nanoce1779_2|570301|organism=Nannochloropsis oceanica|type=polypeptide|length=1517bp
MVNRLEETLKALSEAVESIDVSADLGVYRQQVLSLPPSLPLSSLSSSAAV
DDDGGRALKHRVAPGMEHVEKCIKSLRALCHAFSALAAVEENYAKATLKI
VKKSGYYLAAPSSPPPSHYGAFRRCIEKEGRSVQKAWQQYMGGKETVGGA
HMTTTSRLSQSVCVTLAQTQDELSGARQEILITQAASHKALAATRAAVVK
AKGKSETKGKELREAVAKLAVLGGGRSRSSSGSDGQREETEAAAAAAATV
ITSSSKHQQKEQQRLDAKVAALRDEAAAADRTLQEATEAYALQKSTLAAQ
VDIILQALSSREEERVSKTKTAFHALYQAEVAAIGTMKKEEETTRESVDT
IDITRDLQAFVARHLGTMVGGEKKEGEGISAAMGQTMRGSKLAECLEMMA
QGGEGRAAPQKESSSQECGQEEQQSLQTQESSDPSRSSSLSVSSSVTRRE
ASIKNCAVSPSSSFPLSPSTSSSPLSPVESERPPVYYSCRIPNGLLAAAT
LPSLPSSRGALVRGNTIAEEEEEEEEEEEEEDGGKGKGIEGEGAMKSTGC
NGNRDVIGGTSTTPATSSCGTVASGKRTLAATDTSSKHQEEGNATFSCSR
GEEDGGKEGGKKGEMGMDDAAAMEAVIKEQSAKALVSSATTPRGTRLSID
HSTFSSSFVPPTSSDILPEVEEEEEEEEEEEEEEEEEAKEDDPSTAEEIK
PFNLPAGERLLKSFSCALLPNNLLIHGRIYVTKHYLCFGSWGSTRVVLPI
EQISFVEKAFTMGFVPNALWVVMRQTGDRYFFSSFIYRDDCFDLLFSLLP
KRMALEMGPLGGGLQHQKRRKKKHQQTGKKNVSWGLETASEPTGSVGCSE
GGKGSQKKKRPSLSTLSPQQDDRRVVLSSSHTSKSGSITNATTIATAAVA
GATATPALPSTLPPALPLKPLSLPDDATVQRMSLLTDEELSCGVSVFLAE
FWGGGREAGKEGASGDFYQAYLEDRGDKEVKVGAWMGREEQDAYSGESFL
NVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGQEGGEKDRVFISTA
LTFTGVPYGEYFYVQTRWVITRLGVEGTRCRLQIGLEVVFRQTVLLKSAI
QSATIAETKKTLQDWLARAKARVLVMKKEVAPTGAMQVSAGGVEAERIEG
GGQERAGVPLKPLSLPDDATVQRMSLLTDEELSCGVSVFLAEFWGGGREA
GKEGASGDFYQAYLEDRGDKEVKVGAWMGREEQDAYSGESFLNVRDVFYS
RVRDGRGIGPKTVPTRECQMYRVEGEGGQEGGEKDRVFISTALTFTGVPY
GEYFYVQTRWVITRLGVEGTRCRLQIGLEVVFRQTVLLKSAIQSATIAET
KKTLQDWLARAKARVLVMKKEVAPTGAMQVSAGGVEAERIEGGRQETAVT
GAGESTGSKGKATMAFAATGAGDMMESDLPEQQQHREQQHAAEKCATCML
CRLSSSSSSALFLIVPILLFFLIFAGMILLMIRMERLTLQVQSLQGEIGG
LMEAVTSAQAIPQQLV*
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Synonyms
Publications