jgi.p|Nanoce1779_2|451246, gene_11380 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|451246
Unique Namegene_11380
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_94:16144..19487 -

Link to JBrowse

Properties
Property NameValue
TranscriptId451332
ProteinId451246
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_94supercontigscaffold_94:16144..19487 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0009540zeaxanthin epoxidase [overall] activity
GO:0016491oxidoreductase activity
GO:0004497monooxygenase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006725cellular aromatic compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL009ncniL009Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00380NO26G00380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|451246mRNA_11380-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|451246mRNA_11380Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|451246

>mRNA_11380-protein ID=mRNA_11380-protein|Name=jgi.p|Nanoce1779_2|451246|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp
MTLRAILTTRRGPPLHPFCPFSTTSTSPPQSSSSSSSTSSSSYLHTSTSK
TNTSKCRNRSLPGCSASSRSYSRSYFYPCNHASTNTSKAHVLSPSLPAYG
RRKRVLIQGGGIAGLSLAFFLERFLPQTYEAVIVERMGEGEDVAMTGHLA
LGLWVNGLRCLAKGGLSLPEVLAQGEHSFAWMLDSGYLTTDGRLLAKPGT
PLQEGDLLFLRRSLLLSLLRNRVSSPILHRDQILSLEDEDEGGREGGRVR
VTLQSGKEEVVDIVVGADGMFSPLVRETTMGLPPPAQRGYTVFRGVYEGS
PLQPGFSFQTWGPSSRFSSVPLADGQVWFATLAHHNSSSSSSSGGGSRSM
EGGREALKEGLLQRFGSWHAPVRGLIEGTREALIVKEEAWAQTDFPRGGG
REGGRAGRGRRVTLVGDAAHGVDPILAQGAGVAIEDAYHLVYHLAHAQGE
GGKEGGDRIAGALSAYEKSTYQRASLLTSISNLSQFIGQLPPGPILSLRD
ALLPSLPPAFKGRIFDACIRPSLPPSFLFDAFASLARAGRKGRREGGRE*
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Synonyms
Publications