jgi.p|Nanoce1779_2|675318, gene_11379 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|675318
Unique Namegene_11379
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_94:9113..15259 +

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Properties
Property NameValue
TranscriptId675404
ProteinId675318
Product nameCleft lip and palate transmembrane protein 1 (CLPTM1)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_94supercontigscaffold_94:9113..15259 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL009ncniL009Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00360NO26G00360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675318mRNA_11379-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675318mRNA_11379Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|675318

>mRNA_11379-protein ID=mRNA_11379-protein|Name=jgi.p|Nanoce1779_2|675318|organism=Nannochloropsis oceanica|type=polypeptide|length=700bp
MTKRQGSLSFKATPGQAHEPASTSSSAASRPVTASTPVDIDPEFLPKKGW
TSYLNTTTLAVCIFFLYIFWCGRGMHRIMYPLAHLPPLKEGEATLDPLWP
EGRAFDVLCYLSDSPEDPHLQAQHPLWQAKGLRYGWGKEERKEGEVEEGV
KEVKLRLVTELQPAEEEEGNAEGKSGGAETKNKKKKEEEEKEVLIPDWFW
RRVRRGKDVYLHVFVTRSPGLVNVTSARAGEGGMEEGGEEGTLAPQVELQ
GHDGYSPLHGVVPLLKRQVYEAKPPKRRLLSGEEIRAPEMLKEGGHGLYW
KPEVAVRLVTDFTLYPIKYLPPQIADHLDIVQVIDKARRVKSYRYRPPVH
ADEIGLTSDKYIPLNSSLASLPLAINYSPLSVARWQMMTVLESSMQTQKG
WGLEETDIDDVRRLITDTNVYLLLLTAIASLLHLLFEFLAFQSDIAFWRK
NKSLRGLSIRTLVMELVSQSIILLYLIDADSSLLITLPSAFGVLVQIWKV
QKATGASLQRSKGGYWPTLVCTRLTTEGKIEGKEEKGKTDINKAEQEKND
SNAAAPGTQKETMDLDRVAIHHLTLVLAPLALGFAARSLLQEEYTGWYSW
ALSTLTSAVYTFGFILMTPQLYINYRLKSVSHLPWRFLCFRFVNTFIDDL
FAFIIKMPTMHRISCFRDDVVFLIYLYQRAVDEGVVEGGADGGEGERLA*
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Synonyms
Publications