jgi.p|Nanoce1779_2|613714, gene_10961 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|613714
Unique Namegene_10961
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_77:55073..58049 +

Link to JBrowse

Properties
Property NameValue
TranscriptId613800
ProteinId613714
Product nameO-acetylhomoserine/O-acetylserine sulfhydrylase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:55073..58049 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL099ncniL099Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G02600NO19G02600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613714mRNA_10961-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613714mRNA_10961Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|613714

>mRNA_10961-protein ID=mRNA_10961-protein|Name=jgi.p|Nanoce1779_2|613714|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MHLKYVRHRKGREAVRCLLVRCRVLTASGRTLRPSSPLPYSYSYLLTLCA
HRFETLQVHAGQSPDPHSLSRAVPIYASSSFVFRDHEHGARLFALEEFGN
LYSRIMNPTNDVFEKRVAALEGGKMAVATSSGQAAQFLTIATIAEAGDNI
VSACTLYGGTYCQFKVSLPRLGIQVKFAQDDDPASFDILVDDKTKALYVE
TLGNPKYNIPRFTELKAVAKKHGIPLIVDNTFGGCGAICRPIQHGADIVV
ESATKWIGGHGTTIGGGKFPLFTDPSPGYHGLKFWEVFGGEKSILGFNGA
FAIRARVEGLRDFGACQNPFGSFLLLQGLETLSLRVERITHNAMHLARWL
QTHRSVAWVRYPGLPDHESHELAKQYFRPGVFGPVLSFGVRGGREGGIIF
INSCVLASHLANVGDAKTLVIHPASTTHQQLTEAEQEGSGVTADMIRVSV
GIEHLDDIKDDFDQALEKATRA*
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Synonyms
Publications