jgi.p|Nanoce1779_2|626444, gene_10679 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|626444
Unique Namegene_10679
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_76:19430..22247 -

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Properties
Property NameValue
TranscriptId626530
ProteinId626444
Product nameADC synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_76supercontigscaffold_76:19430..22247 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030976thiamine pyrophosphate binding
GO:00086832-oxoglutarate decarboxylase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009234menaquinone biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL098ncniL098Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626444mRNA_10679-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626444mRNA_10679Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|626444

>mRNA_10679-protein ID=mRNA_10679-protein|Name=jgi.p|Nanoce1779_2|626444|organism=Nannochloropsis oceanica|type=polypeptide|length=400bp
MASQKDRFENRVTAESIEEALSPLVEGGREGVKRFPAFVLRLQHVQHICH
KISARLLKRTRRRKNEEEEGEEEGEEGTSSSAFDLLAALHPTPAVAGEPR
LTALQAIRQLEPFDRGFYAGPVGFLSPACAEFAVAIRSVLIVRERAHVFA
GAGIVPGSTAEGEWAEIGAKMANFVRMFPRPSQPLRSLPNLATLWATLVV
EELVRNGVTHFVIAPGSRSTPLVTAAARHPHTTLMVHHDERGAGFYCVGY
ARARGRPAAVIVTSGTAVANLLPAAVEAATDRVPLLLLTADRPPEQRDCG
ANQTVAQPNMFLNFARWSKDMPCPTHEVLASSLLSDIDYAVSMARGVDPG
PVHLNFMLRENLAPEGGAVRDTAVPGLHSEWPDALVQTLQARLRWQVSL*
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Synonyms
Publications