jgi.p|Nanoce1779_2|379923, gene_10614 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|379923
Unique Namegene_10614
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_62:24344..27082 +

Link to JBrowse

Properties
Property NameValue
TranscriptId380009
ProteinId379923
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_62supercontigscaffold_62:24344..27082 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL086ncniL086Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00180NO26G00180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|379923mRNA_10614-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|379923mRNA_10614Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|379923

>mRNA_10614-protein ID=mRNA_10614-protein|Name=jgi.p|Nanoce1779_2|379923|organism=Nannochloropsis oceanica|type=polypeptide|length=842bp
MDLLRDANCHVGSDDCAPSLDSRGKVQGQSEKMTRASDKTFKEESNDVHS
IRTGNNCGSKEDDDDREKETNMEEQDILSLAVLQCLHLVIRAGKHHLANH
LQILLSPLLLQYLLYPTYTSTILLLLTKLSQHVELSLLLPPLLHLHAFTH
PSPLVRAAAFRIVCIGLTVKDKVAFTSVTDRVIQESLLTIALDGVEDEEE
EVKEAGIELLWLVYDPFFSMQKKIEAREGEIKNERKSFFSTFVREQGGET
LKADARSCLLVKVLEENKEEGQGEERQQEQQVLQKQLQQQQEQQQVEKDQ
IQERGKEKPQQVTKQEAPHSPQSAASLVNRAKTSNFRWQASDWSLIPRPT
FATKPRSSEIKAFPPSSSCVSSASTSPPSFLFPPFSPPSPPRSCRQHTPS
IPQRSPIQEKGLVRWQDNDDLVDEGHRKENASITHAAPFSCSQPQRRQRQ
RQRQRPSSGHRPISSPPRHLLHGKGLVEWCDEEEEEEKGCKEGYTAATAN
DDYSSTHAPSSQPPTSPFRSRLSRLSHTSSSSMPFRSPLMPSPSPPSALL
IEYLSPADIHPLPQPSIALPLLLESLHTADWPESFHALTTVRRFAHQHLA
LLLTLPSDRLQLLLRQVLRHVNNLRSAVAKNALLALADLWAGLASSPSSL
SSSPLSLSSRLSFPSKSNGTEITVQRVMEGELPAVIPVLLKRFCDTNDFL
VEAAESALNTIILHTPDTTRVLHAFLSLASHKSPTGRSKVASQVLRCLLV
LTSAAAGSLSSAVTAACGGVSPRKRKTKISIPAMMTITGKRNNNASTSGL
LGKDLQEWLQLATQQWLKDANCETRAQGRKIAEVLPLLVQR*
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Synonyms
Publications