jgi.p|Nanoce1779_2|575133, gene_1049 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|575133
Unique Namegene_1049
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:1093953..1095915 -

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Properties
Property NameValue
TranscriptId575219
ProteinId575133
Product nameAmino acid/polyamine transporter I
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:1093953..1095915 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006865amino acid transport
Vocabulary: Molecular Function
TermDefinition
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575133mRNA_1049-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575133mRNA_1049Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|575133

>mRNA_1049-protein ID=mRNA_1049-protein|Name=jgi.p|Nanoce1779_2|575133|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp
MTAATCLNEATRLLNVNNTILQTNAPVSTTTAISRGSNHHHFPGWGTYNE
QIRIDDAAITMAAHALDSRRHPHEMLGPLQSSSICGNDILSSCFYSIGLV
TSCAGQLAPICFLMVGLVLYLFRSVYGEAITAICQNGGIYALLINTSTKA
VAASAACLSILAYIATGVVSAVTACNYLHAVFPDLINVPVAACCLLALFA
FIVGMGLRESAGVATVICAIHVGTLALLLVLGLVYVLFNDLGELRANFHL
PFPSVSITGTDNLGGVGGLKGAGNVGGSEEDVLPGSIWTALLFGFAAGIL
GVSGFETSAQYIESQKPGVFLLTLKNMQQAVCVFNPLLSLLSIAVLPVPV
VVAYSETVLERVADVMGNWLQAALGLGPVREPDSMINLGRLFRIWVSLDA
FVVLSGAVLTAYVGIDGLIYSMTIDGCLPSFLLTRNEWRGTDHFIILSYL
LLAVSQVRWRNEF*
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Synonyms
Publications