jgi.p|Nanoce1779_2|611877, gene_10292 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|611877
Unique Namegene_10292
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_60:3985..5732 -

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Properties
Property NameValue
TranscriptId611963
ProteinId611877
Product nameBestrophin, RFP-TM, chloride channel-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:3985..5732 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL084ncniL084Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611877mRNA_10292-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611877mRNA_10292Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|611877

>mRNA_10292-protein ID=mRNA_10292-protein|Name=jgi.p|Nanoce1779_2|611877|organism=Nannochloropsis oceanica|type=polypeptide|length=557bp
MPSKDSSPSKPFFGMKLFSPNLWRSSASSPSRRSSQDRQPSLLPLQAPSH
SPSTQIQAPLASSISFGDFSRADSTTPNNMCSSSSLSSSPLAQTSSLAQI
TPPPPLLNVIRAKDPKAFKGKAALTRYLDAMDQEEGRGMQTGGLLADPTQ
ASSAKHTEIPTIRYSSELAKQNFSFLRIIFCGRNGMGSFWFIKKILPQLV
VGILLNLVVEWIDLKHTGWWAIRADTQRLHGFVGAVLAFVLVFRSNASYD
RYYEARKTLGLITNQCREAVLETCSMFVIKDEGEHNNLYRNEIRRKFLVM
IAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEV
EGYVNVQPSARAACVASEIKSIAQLLARNVEFSILYYSKISQCLQLSLDA
QETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILV
VAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDETRDISNFTHSLNKG
FIPSNIRRTAPEPPAPVPDLAASQSPPEATTPTKPPPESPESAAAAPSSS
VPADAK*
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Synonyms
Publications