jgi.p|Nanoce1779_2|674601, gene_10177 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|674601
Unique Namegene_10177
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_48:67061..76516 +

Link to JBrowse

Properties
Property NameValue
TranscriptId674687
ProteinId674601
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:67061..76516 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL068ncniL068Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00170NO02G00170Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674601mRNA_10177-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674601mRNA_10177Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|674601

>mRNA_10177-protein ID=mRNA_10177-protein|Name=jgi.p|Nanoce1779_2|674601|organism=Nannochloropsis oceanica|type=polypeptide|length=1674bp
MLRPAAAFRPPHKHGTQIKKKCLRHLDASPAKSAGGVAVRKKKAALKPSF
FVGGGRGRRQNEEDLMLGLLEEMGARMTQEQAGLKEEDYETEVSMRPLSS
DEEDEEQEDVEEAKGEVEEEEKEEEMEEKEQRQEEKPKATRTHYPIPSIV
STVITTGGCVSPHELWNPTLYVDKGTLNLPWWDSSSPGNSTGGSSTRILA
LPPPPPPHIPSIHPHVEVARTRGVKELVDWFIGAALRQGNAADRAVLFTP
MTSQLGKIMFLRRSFQIWMQDNKLQEREEKEGGRGLAVGSACRRVLTDPV
LPQTATCQQDLGLAKALTGEVIKLPPDIAVELCEALGLKALGLVSSLHEQ
TQHPPFLASSLPPTSMLRRKQSRLDQPPVLRSRHHAPCLYLPLSTLSDAR
LTLLEKNEALDVSLLKGHALRINEKHYQKLKTLYTKQHISRGPPRQARKH
RPSSSSSSSSSPSSSACRFSSSLTKEEEDLFHERLGCLLFRYQALAATGR
EDPSFHDADDACERSLPPRVFDVLASLFGAQMECFASPFNCRYSVFCSSQ
WDLDGYFGSVGSFFAFRPLNGMYVAHPPPLPTMVECMVKHMDRLLARCGP
TRHLGFIVVVPAAFVSSSVPILNKLLQGEHPASSFLAWSLTVPADQYAFV
AGSDHYQPRHYVRPEPSSNNSDADLLLLALLSPGARASSNYELTGGRQRQ
LLEAFASIVALGLSYMYRHMMDVDNEDNLAMGKRDKRKKAAAKIGAAGGG
KKDEKRKKQEAKSQKKATKGGCGGEKEKELQEEDIEAILAEIRAKDAAKT
AVTITESPQPSPRTNFSLTTLPSGELLLFGGEYYDGEDTTVYNGVFRWHL
ERGEWRKIESLNAPPPRCSHQAVSFRDYLYIFGGEFGTSDQFYHYRDLWR
LDLKSNRWEELPSQKDTPSARSGHRICVWRHYLVLFGGFYEAFRETKWFN
DVFLFNLQDLAWKKIILPATAPAPSPRSGCQMAVGGDVVYIHGGYSKVKP
TVTTRGGTPQSSKAEGCVHDDMWALHMKNVPAGGQPFWERVSRKGTPPSP
RSGATMVSYKTIALSFGGVHDVERKQHAISSLFYDDLYQFDMLRRRWYAV
GLRNNSCRGRGGKEGGEEEGKKKRKKKGDGGGGGSGKKKKNGEGEEEDGK
DEKEEEEEEEEEEEEEEEEEEEGFAYIDLDGNVVYIRGDELEAEEEAEEG
EEEGGREGVEGGGRGQGEENLAMEVAPGKMEAAKDDGQEEKKEHKAKLSA
SSSSMEAAAAAAAAARKTATAATAATAAPITAKKEIRVVEGFGLAVVETT
ASSLPSSPSSSGGWERIGPLPRINPALTMRGHLLYLYGGIYEDGDREYSL
DDAWCLDLNKRQEWRCLLPGTMHLQVWKGEDDDTTLGGDSDDEDEDSDEE
EEEEEEEEEEEEEGEESEGDGSSSSSGEENDEDAEEVGEEGEEEREETET
KHTMKKEKNKKGERKERKEKGETKKKKEKKEKKGEEGGKEEKKRQKKKKT
LREEIAELQSSLSIDDTNTTPQLGEKLRDFFARTTVYWTTLAVAQVEEDA
TRYLEELSLSTSGRPGSSSGSSPSTIPFSTDDDAHDPSSLPSSLPPSRAG
VAGVDYIMREKEYKKLAFEMASRRYEELRPVLERLNELETEQREMEEKLA
QRTAGKGGGGGKGSRGGGGKKGR*
back to top
Synonyms
Publications