Naga_100041g22, gene9301 (gene) Nannochloropsis gaditana

Overview
NameNaga_100041g22
Unique Namegene9301
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:220951..224075 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100041g22
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:220951..224075 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL083ngnoL083Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL082ngnoL082Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G00620NO24G00620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9582rna9582-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9582rna9582Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9582

>rna9582-protein ID=rna9582-protein|Name=rna9582|organism=Nannochloropsis gaditana|type=polypeptide|length=922bp
MDPQSMIASKVTDGQSQISSCQDVNENIISATTAGSMKMHSSAAGLRIGP
SSFPFATSTPTLGASASATSSVACSKTRPSGNRPNSNSDRRVWSKDEDDS
IRNLVAAHGTRSWSVIAEKIASDKTLSITGRTGKQCRERWHNHLDPNINK
NAWTEEEERIMSEAHRELGNKWSEIAKRLPGRTDNHVKNHWYSFMRRNVR
RLNREVAELGTSLRGDQEARGNIPYSGSESSSSTQVMPGRQHESKIKHKE
SSNLTFSGASATMFSETSDEAAGNGGKVNLTTSMLAQFFQDEGGHASAHD
TKAISAAVEAYVTAVGSLNLPATANSGSLSAICGQALSTSSAPGNTRMGG
KGPKSGGTRKGNRKSRCRKAANLAELQRYMTAAADAANEVLRETGPGEAA
PHLSALTAVAETGIKPVESPRQSTNVCTSATDLFRDKLRKKLEETGGINL
PTSAWASLRSQKATRRAVKLSEEHGTMIGLSAERPESKFNAQSLSPQSQV
VDSLNPPSVDKLFGGRQGVGQQGKNSSPLVTAMDGRFSVPAAHYDPSTSY
SQEGPNLYPSDSVINGVEMQTQDLILSPIPVGDLLTSFQQSQQQQKKRKH
ESSSCIEAGCVSACGGVSCAETEDEGSSGSKKQRKDMSFATGEKASRIDP
ESSHTIDFSATLAATESGDEGSTPQPMNSIGNPYGPEKMPDSKQEGLLAT
AAGPRDRMNNKSPSFAGATTQSIGFESPTLPFLSCDQRHHLTTLFDGFST
SVLDASAAGVFFQPSPTGAGIIGGSEYDFEVLQQLWAGSPKSGLLHPPLL
PVGLHGSQPPQQGTEHSAPQQNHTSGMQVSDGAATAQNAHLFCGMTANTA
MASSSYPSAMLAPPPPAGTVHRSSLYYPSHQNRQARLHAHESLRLDSDVT
QTDDYVDSQDQHTSCNAWIVSE
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Synonyms
Publications