Naga_100738g2, gene8772 (gene) Nannochloropsis gaditana

Overview
NameNaga_100738g2
Unique Namegene8772
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:192163..195199 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100738g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:192163..195199 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL073ngnoL073Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01440NO25G01440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9045rna9045-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9045rna9045Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9045

>rna9045-protein ID=rna9045-protein|Name=rna9045|organism=Nannochloropsis gaditana|type=polypeptide|length=499bp
MATPQQAVSYGASRTVVAPAKPGRRSQGRMASPSPRLPPCRQQARTLLGT
FLAMSLLVLPATSSAFLMPYTSSRRTSPLPFSRSTLSSQTYLSFPHVLRA
SRLSTSSPSSSSSSSSSSFSSSSSSSSSSSSPSSFSSPSFPSPHTRILEP
SPPDVIDATFPFRLVLRRLKNAVGHAVTVGLMLVTSSFGAFSLPFPAAAI
PPLMSSVPVPSTSMPATVGYRDASLLPYELTMGETSRIGIFQEATPSVAN
INTFVEQRDAFSMNVMEVPAGTGSGFVWNDKGYIVTNYHVIRSAESAQVT
LTDRDGHQSTYKALLRGFDPDKDVAVLRVEAPPASLRPIPVGSSSTLKVG
QAALAIGNPFGLDHTLTSGVISGLGREVRSPSGRPISNVIQTDAAINPGN
SGGPLLDSAGRLVGMNTAIYSPSGASAGIGFAIPVDTLKFVVETIIKDGK
VVRPLIGITYLESSQAKALGRKGGRGRAGGRAGSARARALTSRRLFSLL
back to top
Synonyms
Publications