CHI, gene8716 (gene) Nannochloropsis gaditana

Overview
NameCHI
Unique Namegene8716
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:29798..33462 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100183g9
Gene biotypeprotein_coding
GeneCHI
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:29798..33462 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL073ngnoL073Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G02030NO25G02030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8991rna8991-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8991rna8991Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8991

>rna8991-protein ID=rna8991-protein|Name=rna8991|organism=Nannochloropsis gaditana|type=polypeptide|length=599bp
MANPEVWTRSGSGGGLRGHSDASPDWAPGARVPFQERIRIPRAWQPGEAK
PENDSDNEEDRPAAGTSKGKSGDRRGGYKCGRCGQPKKGHVCTNKPRLRA
AFVETTEVEIQAERDAEMVLRRLDTKLQGYPESYGLTFRWAPSAASLYAA
QQQQQEEQQQHCDQRQPQMASQQLQQQQQQPLYERAHLLATPSTNFSQQQ
QTEHLLPMQAGGACAMECLSSSDHSHQVQQVQDHGPVQLQQSLEPPHSHR
GRGRAPPARVTGGSDSGVLSATGERWGRRRAESDRAAPASVLLTKGNIFK
CEKTLFKTENLAEYDFEENLLRTHEADTCLELFVLCGVGKDTQVVRTPGS
KPEQVYITIGKRNIMARSCIFRLALFCAILLCLSDGYGKTSNDTCEVKGK
EVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGL
YLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTV
PAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDR
LSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHIN
back to top
Synonyms
Publications