Ubp16, gene8365 (gene) Nannochloropsis gaditana

Overview
NameUbp16
Unique Namegene8365
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:463431..466852 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100244g2
Gene biotypeprotein_coding
GeneUbp16
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:463431..466852 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL067ngnoL067Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01650NO20G01650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8630rna8630-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8630rna8630Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8630

>rna8630-protein ID=rna8630-protein|Name=rna8630|organism=Nannochloropsis gaditana|type=polypeptide|length=1023bp
MKHRGQQGGLKGGRGTGDVQSFKRLLQGPGNDGAHNGQAWDIGKPRRRIK
FHKARKVENGFVSLSTGTTKGPCPASGCLGGVVAGPLTGKKARERFSEAM
DKDAAAPGLPTPEKGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNAT
LQCLAYLPPLAQYFLSKKEEERVPSVLSPGAGQGHRGGGQARGGWLGLVR
DLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKALNRHFRVG
RQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRS
QVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRW
RCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESL
RLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQV
RQVGLPTVLHQHAYLLFYVKVGPSPPPALDRRGRDEEEKEGEKRLAKTSP
GPDTATTSNGSGQGRRAATPGWSEVLGKLREEDAGNEDHTEGLEGGEGAD
TAWAQPEGLALFMARAKREAGEGGGPEGGQGNGRNGGADGEEDVGVRPLP
APTNAAPVREEGSAPHTGTGPAHSLAPPHSTPEDHVVVSAEGRPPPSTPP
SASSTSSSSTGTSAFLPALDVGPVVMSYSYAGKFFLTRFSRRRWHRTFSP
WRRHRPGEEEGRAEGLSLEGRAEGLSLEGAMEKAGGTRRSRRLAGMGQGG
KADDEGGGMGEEERGGGRGSSTGVVDGMLERKGEDAGDSELVASTAALSE
ASGLPPALSLSSLPVEGKEKRRPREAGLRVLRREEEGVVLVPRGVRACEK
GGRRALDVRALEALRDAPLGAMGTWDGWGRVLCDGVPPRFLTPLVLGSVR
FTLYRALILTRFFCILCGQWGSGRMWSLTSKGGQERLLTLRQPATGFWCR
RNVRKETRRRKESLANSLPLPLRDVRREFGVLAASRIGMRTRGGANPTLS
TCASKSYRSSLDSLIPYKEMVLA
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Synonyms
Publications