Naga_100064g28, gene8278 (gene) Nannochloropsis gaditana

Overview
NameNaga_100064g28
Unique Namegene8278
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:211539..213923 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100064g28
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:211539..213923 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL068ngnoL068Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL067ngnoL067Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G00450NO20G00450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8540rna8540-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna8541rna8541-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8540rna8540Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna8541rna8541Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8540

>rna8540-protein ID=rna8540-protein|Name=rna8540|organism=Nannochloropsis gaditana|type=polypeptide|length=303bp
METHNLGPNGGLVYCMDYLEQNFDWLLERLEALQGRRYVLFDFPGQVELY
THGEAVQRLLQRLEKWGCRLTAVHLVDAHHCSDAGKFISAVLISLTTMVR
LELPHVNVLSKVDLVESYGRLAFDLNFYTDVVDVQRLLPYVGTRSTYKDP
GREGEEGGGREDENGWEEEVREGSIEDGGEGKRDGREAGTSGGGRFARRY
RKLNEALCELIEDFSLVAFHPLNIQDADCIERVLAVVDKCNGYLLGAEER
ALVGREGEAALLSTLSGLAFRAQPDADRVKDVQDRYMDIEDRDENSLSKN
KAR
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protein sequence of rna8541

>rna8541-protein ID=rna8541-protein|Name=rna8541|organism=Nannochloropsis gaditana|type=polypeptide|length=373bp
MKRNLIHGPRFGQAVIGPPGAGKTTYCHGIARFLSARGRPVAVVNLDPAN
DKLPFPVDIDVSELVNLADVMETHNLGPNGGLVYCMDYLEQNFDWLLERL
EALQGRRYVLFDFPGQVELYTHGEAVQRLLQRLEKWGCRLTAVHLVDAHH
CSDAGKFISAVLISLTTMVRLELPHVNVLSKVDLVESYGRLAFDLNFYTD
VVDVQRLLPYVGTRSTYKDPGREGEEGGGREDENGWEEEVREGSIEDGGE
GKRDGREAGTSGGGRFARRYRKLNEALCELIEDFSLVAFHPLNIQDADCI
ERVLAVVDKCNGYLLGAEERALVGREGEAALLSTLSGLAFRAQPDADRVK
DVQDRYMDIEDRDENSLSKNKAR
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Synonyms
Publications