Naga_100017g56, gene827 (gene) Nannochloropsis gaditana

Overview
NameNaga_100017g56
Unique Namegene827
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:596317..598697 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100017g56
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:596317..598697 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0007049cell cycle
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL052ngnoL052Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G03720NO03G03720Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna864rna864-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna864rna864Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna864

>rna864-protein ID=rna864-protein|Name=rna864|organism=Nannochloropsis gaditana|type=polypeptide|length=222bp
MSFAVPAASMSSTPAAPAADNSVITLRGSTDIVVEFFEHAITCILYQRGI
YPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVV
VTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQI
TCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRS
VNTKVHKVDTMVAYRMEPAGQG
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Synonyms
Publications