Naga_100017g38, gene811 (gene) Nannochloropsis gaditana

Overview
NameNaga_100017g38
Unique Namegene811
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:559213..562464 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100017g38
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:559213..562464 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL052ngnoL052Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL048ngnoL048Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G03890NO03G03890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna847rna847-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna847rna847Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna847

>rna847-protein ID=rna847-protein|Name=rna847|organism=Nannochloropsis gaditana|type=polypeptide|length=1006bp
MASMGWFRAPFASRPSFPKSDASLLSSPVRKSTSRNVLALGRLTTAFVMI
SSVCQRTTTVAVDRSKFRKCADTGFCKEFRDVVPGALPRFRVDAASLKHD
EHAGFLGGQLLSSDANAKALNFSLQFYNDGTSRLKIKECDPLRERWEPPD
VVIEESLDPTAIRVDTSKSDGSLHVEFANDKLLRVQLDPFQVDLLVGGVP
ALTVNKGGLLHFQAYRAKKDKANAGSGGEESGQKIEEEVVDKHGGKKIVG
YWEDGLAIYEDGSREEKPSAEEEAAEARRLQEAAAADEDKWEEYFGGHTD
SRPHGPASVGIDVRFPGAEHLYGLPEHASSFRLKTTKGPNAQYAEPFRLY
NLDVFEYELDEPMALYGSIPFVASHTAALSAGVFLFNPSETFVDVEAGSG
HGDGYQTHWMSECGVLDLFLLPGPTPRAVAKQMTALTGTQALPPLFSLGY
HQCRWNYKDEKDVAQVHGKFEELDFPYDVLWLDIEHTDGKRYFTWDQGVF
PDPVSMQDSLAAQGRKMVTIIDPHIKRDDNFAIHSEATAKGLYVKDKFGA
DFDGFCWPGQSSYLDFTDAGVRRWWAERFALDKYTGSTSNLYTWNDMNEP
SVFNGPEVSMQKDCRNLAGVEHREWHNLYGMYMQRATAEGLTLRDPKGLE
RPFVLSRAFYAGSQRFGAIWTGDNKAAWEHLQVAAPMLLSINLAGLSFSG
ADVGGFFQDTDAELMTRWMQAGAFQPFFRGHAHHDTKRKEPWVYGEPTTS
RIRAAVMARYTLLPYWYTTFYIAYAEGLPVMRPLWMEYPTEKATFDMDDQ
WLIGQDLLVKPVTTAGATSLSVYFPQGLWYDIETLSSISGPATRTVPAPL
EKIPVYQRGGSIIPRKMRLRRSSSLMTHDPFTLVVAMNAKGLAEGLVYMD
DEHTLKHEKAGEFVLRKVTLADGMLRNVRQGGAEDRPFRNQVERIVVLGW
KAKPKAVTLSVSEQGGAEKQATTQRSLEFMYDAKKRVLTIRKPEVMLDED
WTIGLR
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Synonyms
Publications