Naga_100067g19, gene8040 (gene) Nannochloropsis gaditana

Overview
NameNaga_100067g19
Unique Namegene8040
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:317370..320930 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100067g19
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:317370..320930 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL063ngnoL063Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01960NO15G01960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8301rna8301-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna8300rna8300-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8301rna8301Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna8300rna8300Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8301

>rna8301-protein ID=rna8301-protein|Name=rna8301|organism=Nannochloropsis gaditana|type=polypeptide|length=945bp
MFPTPPPHRKILFEQVQLAFTYLILHYGTLYSIHRHGGPPPMNHPPPMMM
GGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVM
ATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKP
APVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQA
ALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTN
GVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKG
VSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRAR
ARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDV
FHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEG
PALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEV
AHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVI
EKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEV
TAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGR
RTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYR
DLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQ
AKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESS
GSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGG
GAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKN
RSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD
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protein sequence of rna8300

>rna8300-protein ID=rna8300-protein|Name=rna8300|organism=Nannochloropsis gaditana|type=polypeptide|length=923bp
MNGPPYFGPPRGMHGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFG
PPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQ
DGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTP
EGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQ
KAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEP
PDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSA
LKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQS
RWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKA
FAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARG
EEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRR
AFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFE
RFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTE
GKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEA
AFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQE
DLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKERERE
REKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSS
DDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGK
KEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSR
SRSNDRAGKRKKKARARSGSRSD
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Synonyms
Publications