Naga_100067g9, gene8032 (gene) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	Naga_100067g9
Unique Name	gene8032
Type	gene
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	KK037248.1:291892..297843 -

Link to JBrowse

Properties


Property Name	Value
Locus tag	Naga_100067g9
Gene biotype	protein_coding
Gbkey	Gene

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KK037248.1	supercontig	KK037248.1:291892..297843 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
SRP229557	2021-06-30
PRJNA174770	2019-07-03
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ngnoL063	ngnoL063	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G01840	NO15G01840	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
rna8292	rna8292-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
rna8292	rna8292	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of rna8292

>rna8292-protein ID=rna8292-protein|Name=rna8292|organism=Nannochloropsis gaditana|type=polypeptide|length=1810bp
MSANERLCDYFAVVGPKEADLENRVVQEDYSIGNLHRALEEAIVDICIVN
HPREVIPFEKNYELLLKPEQVEEGLGEGGKLQLAKHRYICFRRRKHRRTT
SYITEVRLVCKSQESPPQGFELIEKTVGGASGDLSRGGSQQVYLAVRYAH
VDETSFRFSIPPVLADLCLCSDEKGGSAPMEYTVLPRPLSRLGLPNENIY
LAYQQGPSAGLCDIPYEAYSLDWFPHEATYEDFPLPQNELPMFCFPKGVV
LKHQKRNDTPMPSYFSFVFTSIDGDRVHVACLQFYELLPDRVLRALEAKQ
RILTVLGAFASGENPTESGGPISLGEWDSDEESVASSVDEEEEESVEAVS
STSGQAAGVETGIPKSSPSTQQSPGRRAATNHNGLISLKCKERALSKSIS
TGTELPRQSSLTGVPVSKSFKPAGRSDHALFAPKCICIISHWPFYRALRS
FLQQIYRISLSPSRVPLERYIAYFTHYMPLPPPGQHVLNLHLDLGMQDRI
ENSTLAPITLHLPDTRSLPLMDLDYEAPFRCLSLDNVLKIFVLLLMEERL
LFMSSSTSLLTEVTETILTLLFPLEWTSCYIPRLPNKLTEILDAPGSFLI
GIYIEGTTDSWVLPQLSDPLFVVDLDHDCIIDAENKDYTTAMENMPILEA
LREKLRTELDRTGVTVKSAEALREGDSAFELPAVPGSQVEDGPAMKLELN
VDIVRDAFLVFMCELLGSYTRYFNSQQAQLDDTDACDMAHNGVFGAFDVS
GFLATAEKTTKALLERVLLTQMFAALVQQRTDHGRGIDRLVFFETCVEEL
KERKDAEAAATTAGANVSLNIYYGAASNPKKRPDDRTLSTRSVPLPTTDS
ANGPPLLIHQAVASMLRREQLLLQQQLHMQLQSGATAPSVSPSTTSPQSA
CPEAALSPRQSQSSPSFFVGTLPRMIIIPGPSAEGCYTPRQSHSYLEGNA
SQNHTPSAMAQSRALRFSYKQFPNTLNKTWMDLPPSSLPPILLEIISRRK
KSLKKGKRMILARSVSECVKDWHTVGTQIGGARDKEIYLAMQIFGIYFMC
LPSRVSYKGKPLRVIMQAMGILQYILGFELEGYMDEAMWRSLLIACGRCG
QASTRKIAIAIFGIMRRAGLSINALTYGQYTKALAEKDAAEFVATTTGLT
LVTSGCGERGRQVPDCRTEMGTVVDETRGGIDDSPWLEERGRGWYLAACE
PSAPETLKNWSVADGFKSLLAGTMKAVVSRKARERPVLQDGDAWTSGLRD
PRVSAQNTTLSSITMNSAGVIGMWVVCLCVKCEYMPLDEEIMTLRQEQAV
DDQTNHLLLCPKCETPLMPRLYYDIKTFKDHVMDSCSMKGEKTKADFSTQ
ASQENILEISLSSYAESSLHSSGVSTGGNISMPTEANKHVTSKMVEPQAI
LEQDVSGRKRLSASNDFSPAATAWEDALSGSVAEKTAREQRGEISGLPSG
TTGGDHVGYLSPFTLRMRLEKLLLEDGEMCLTRDWARTHQPELYWNLVWF
TTRLSIPFPFLLDSLDPSFADAAMNSFSTTSPDRMGSNAQPTAEKAVKGY
FSNTFRSIHSPGMSRQDSTERLAQFFFHEVVVVGWEGEVVRNRCEKVETM
LKQRSFELRVTPPKASSNVGSYTITGAGVLPTFQLSVPSISTTMTLSEAL
RQQIIGVETAMAKTVEYSDAIGPLTVAQLLPNISTQELEAIEEVKRILLI
EGCAGLKEAITQFFILKEKQGGWTSEASLGSPYRVFLKLAANFHIKKLHN
IAPISNLMANPGLEHEYTTAVMRLGDRFVREKAGQDERQLLAELPKRDAI
KFRSAFGPLY

Synonyms

Publications