Naga_100290g6, gene7911 (gene) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	Naga_100290g6
Unique Name	gene7911
Type	gene
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	KK037247.1:734858..739465 -

Link to JBrowse

Properties


Property Name	Value
Locus tag	Naga_100290g6
Gene biotype	protein_coding
Gbkey	Gene

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KK037247.1	supercontig	KK037247.1:734858..739465 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
SRP229557	2021-06-30
PRJNA174770	2019-07-03
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ngnoL062	ngnoL062	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region
ngnoL061	ngnoL061	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G00260	NO21G00260	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
rna8167	rna8167-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
rna8167	rna8167	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of rna8167

>rna8167-protein ID=rna8167-protein|Name=rna8167|organism=Nannochloropsis gaditana|type=polypeptide|length=1277bp
MNLWCETLVAEAEGLLQEADSYLFLPHACDGYERVALLAVDHTKGLHVRA
ESHQLERPNTVDTYHQEEEATRWVGWEEMRRLADDRFGGHLPRALPQSHV
HQMLTCADNLGSLKYFHEAHLLEGIRVSVMQGRSCQRCGPTVVGFEKGKG
KDSPQGRVPSFHTSPSMWTSPSSASLSTWQHSLDERWSPNGGTSPHPCDA
LHAAFYALHSRAGNAHQCLVLLGGFSGANDTRSQMLRVLFQHYQADAPVL
VRRISAAISLLSSLLVLEDAALLSSPLKISFSIDLQTPPEGQDHDSTRLT
GTLTGAALDIFMIERDPAKYDALRDALASASGTETLGMDGVEAGGPYPIS
LGTLYSSTSHTYTNALGGGNPPSPMPVNGASLSATALKDLDLSDLSSSLS
LPLQNPQLWTETKDEKKGDKTFEALWSSFQAVGVGKSDAVSVLRAMAASI
VLSKASAPLPLSLYWTFELLNFPRKLTKVEIQRVGASERDLKQLAREAFT
LAIQELVGLLNTALSSNNPSPSSLAAPQSPSPSTEPRILSILNLPAPTLN
HNLGRFSDLAAALAVIQTMTQIGPHLAEDYRANPSQATTGTTPEGGKEKQ
EMCEKKTSGKAEAAAISSTEEAESHAKSSSGRSPENSGSMDSNSGTEKRK
ECRGVKNFPGPAQGPGEIVNSAVESVYGLVAAVNRATLARVAENKVEREL
KASLRLGKTDDVTLPWGKTLLAKPLIRLNAAMLPPDLAQLVGCQRRWSGK
EAATVLDGLIAWVDRAVGKSGDRTDTSGTHASQEKGTERMEDHGQATGAG
EVGDSGEGAGTRACGGEREGAREEATGEGEVGDQAMEEIGEVASKARAPP
TPARTPAFHLICDLKTHSSPTTFDGIKVLQQIRLYQLDTLAQGFPFVGPS
PNPVFSTSFISQRILSGGDGGPGAHGGNPLLRGKNQQLFPGLNSVTRSRL
SAYMSPAQSTGKVSTGAPVPARVSRTGGPNMSCARTHAGPLPGILPANQP
DTRNRLGSVAAPAFPPMDGRARISAKDSTFATNHGHMQYQQPSNPAQPTP
GYLQEECWALRRRNQELTALSMELAEMVTGPSGRHQSTNTSEQGLFPGVG
EGSGKGREGDARSLSEVQAKVMEVRASVYETLDKFTKVIWDTFGFDVRKE
GVVRLRHLRHEIVGHLDALIAQEESLRGLWEHAEGIYRMEEEAGSCFSAL
HAEQPPILVPGPVSRGIGKPQHGHFPHRHPIYAPQNLSSFPPPLSQHNTH
RYPSLPHPQGLRSLAPAYADLHAHQGP

Synonyms

Publications