Naga_100023g36, gene7792 (gene) Nannochloropsis gaditana

Overview
NameNaga_100023g36
Unique Namegene7792
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:431552..435410 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100023g36
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:431552..435410 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL062ngnoL062Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL060ngnoL060Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01480NO21G01480Nannochloropsis oceanica (N. oceanica IMET1)gene
NO21G01580NO21G01580Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8048rna8048-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8048rna8048Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8048

>rna8048-protein ID=rna8048-protein|Name=rna8048|organism=Nannochloropsis gaditana|type=polypeptide|length=595bp
MPMRVDPEVVLARFQALLPALRRDTKVLRAFLTQYFTAPGSDLVEHVPPD
HSESPALLLSLADHAPYQRWAAELNHFWKQLCRKVSDDVFLNPQRYSILR
RTHPVVIPGGRFRESYYWDSYWIVLGLLACDMKDTARGLVQNLLDDVANF
GFVPNGGRIYYLNRSQPPLLSEMVLALVEHDPSGIDEAFVSEALAVLEGE
YRFWMQDGERAITVSPPPPIRASTQSQTWTSSSPSTSQQAEPPAQQHVLN
RYWTASIHPRPESFKEDLHHAGLADCAQGFYANIAAGAESGWDFSSRWIS
PCDKGEYALERITTTDIIPVDLNTFLYRMERNMARLHDYLLARQMGPGCG
TPEAKAEPPRETSCKVPPDSRESWVSPKAQKFAEASAKRALAIDQLMWDQ
ETGMWRDLWMPASGRGASNLFTAAHFAFGKVRPASNFLPLWGRVLDNPTL
CSVASRRKLAALDGLARSGLIVAGGVRTTNVETKEQWDCPNAWSPIVHMI
IDGLENLGAGDADRLARSLAKAWLESNYLGWASTGYMYEKYNGKVPGARG
EGGEYYPQVGFGWTNGVVLHLLKTYGQFLKHEAAAPPSTESPAEQ
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Synonyms
Publications