LSm1, gene776 (gene) Nannochloropsis gaditana

Overview
NameLSm1
Unique Namegene776
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:474457..475802 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100017g1
Gene biotypeprotein_coding
GeneLSm1
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:474457..475802 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL048ngnoL048Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04180NO03G04180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna810rna810-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna810rna810Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna810

>rna810-protein ID=rna810-protein|Name=rna810|organism=Nannochloropsis gaditana|type=polypeptide|length=372bp
MPCFLVFRASSYSTGSQSNKNPMEPGPGKPRPLQGVWAQPRSRPSPPSSE
PPSASANSGLTGTKIELSDLFGARPSVPQSTGTGQAPPFPVQPQYLQHHP
PPQAQAPPHYPQTTPPIQYPPHQVQAHASAPHQLAFPASHPFHARPHPMP
PGAMTMHGRPPPGLTGNGFASPSGSPPSAPPFHPNAPPPFPPQQAQPLHP
SAHMHPPQSLASTSTAPGPRPPQLQQEQLQQLRMMMHAGGAPQPGPHYML
PPRPFVAVLPDYLPGAASLVEQLDRRVLVVLRDGRNLVGVMRSFDQFSNM
VLEDTYERHVVDGKYGDLPLGLYLVRGDAVVLLGEVEAEREGKSLEKVTT
EEILELLQGSGEAGAKLEWDFE
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Synonyms
Publications