abcB3, gene7356 (gene) Nannochloropsis gaditana

Overview
NameabcB3
Unique Namegene7356
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:339090..340304 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100334g5
Gene biotypeprotein_coding
GeneabcB3
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:339090..340304 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL045ngnoL045Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL044ngnoL044Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00570NO26G00570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7598rna7598-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7598rna7598Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7598

>rna7598-protein ID=rna7598-protein|Name=rna7598|organism=Nannochloropsis gaditana|type=polypeptide|length=287bp
MAVSNAAVLPSAGDAKDKDALTASTPAPPAPKVELVPFSDLFYFADGLDW
FCMFLGTLSACATGVAMPVFMIIFGSILDEIGTGQGSFKDTINQLALAMS
ALGAGTFLVSAFQVAFFAYASARQTERLRATLLRSILRQEIGWFDTNNGG
ELATVLSEATSAFQEGTGRRVSEGVQALAQFLAGLIIAFTQSWRLSLVLL
AGLPLIGGAAVALSSVMSEAKAATSAQYAKAGGVANEALGAIRTVASLGA
ERKFMEAYNRLIEEAERWRTICPVSWRGEPGASRAGL
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Synonyms
Publications