Naga_100113g24, gene6567 (gene) Nannochloropsis gaditana

Overview
NameNaga_100113g24
Unique Namegene6567
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:515619..518174 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100113g24
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:515619..518174 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL035ngnoL035Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02020NO16G02020Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6793rna6793-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6793rna6793Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6793

>rna6793-protein ID=rna6793-protein|Name=rna6793|organism=Nannochloropsis gaditana|type=polypeptide|length=782bp
MSMEARKVHVGAVGLSQLPKKMKRPREEVGSHQLTAFQPTPSRRQHQNAR
QQLPIWRQKTYVVETVRRHASVVLVGETGSGKSTQVPQFLLDAGFCAGIV
EAQGSTPSPIRARKLIACTQPRRVAAITVAGRVAEEMGCALGQAVGYAVR
FDDKTGPRTVIKYMTDGVLLREAMTDPLLTRYAVIILDEAHERSLQTDIL
FGLIRRAQRERKDLRVVVMSATLDVEVFRRFFETGGRKEEKALIKRHGEN
GKHEKGMLSREGQASTVGVVRIEGRQYGVEVYYCEEAQEDSIDAACLAVL
QIHESEPLPGDILVFLSGQEDIEALAELLSESAGTDTSIGKTGLCMEICP
LYSALAPEEQAKAFHPPKGPAKSTRKVILATNIAETSVTINGIRHVVDTG
WVKVRRYVPSTGLDSLKVTQIARAQAQQRTGRAGREAPGKCYRLFTESAF
ERLDAVPQPEIQRVNLTQVVLQLLAMGLDDPQHFDYLSPPSATALARAFE
TLLALGCIAEGGLSPGGNVDGTRIVIPEKDDRQAVEAQADQKPSGPAKSR
PVITPHGRRVASLPLDPVYAHFVLRASELGCIFEALTAVSMLSAENVLYM
PSPHGGPDAAEQRNRATTAHRALAAYDGDVPTLVHIYERWVAAKKGNRWC
WDHFVNARAMKKADEVREQLLLLVRRLGLDPSQSCGNERQIFLRSLAAGL
FLNVARRQPATSPALGKYCYKMLANGREAAIHPSSVLHARNPAPQCVVFT
EVLTTSRPYIRGVSIVDPADLQELVPQFFGRA
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Synonyms
Publications