Naga_100027g16, gene6488 (gene) Nannochloropsis gaditana

Overview
NameNaga_100027g16
Unique Namegene6488
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:315635..317902 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100027g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:315635..317902 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01560NO16G01560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6710rna6710-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6710rna6710Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6710

>rna6710-protein ID=rna6710-protein|Name=rna6710|organism=Nannochloropsis gaditana|type=polypeptide|length=755bp
MPVESTISSALAVSASYPKSLEACAKLPARPFDDSFSGEDVSDCHSPGIN
PCLSNGWERFRLRLAQRTARRTLLDAKSTTVTSSSTVTDLSFGSGVRHRH
HSSSWSPNFGEGRARRTRFAFAYKREKMLTHERLHRSLLCGRVSAQSFRR
QCLRAWEHGQAITGSFSQSFGNGIDAFTYTKRESTLFSRSNSSLPGSTLA
PAAFLSRVGEAWFLRRWLACWQRRGRRYHQLQIAGRFSDRNMSHLALANL
FLYRGRRRRARMAEQKGDAFHARRLLSCWDFLARERLRQQKMTPFRQSAI
AADASSLNVTPLNTSYSSSLIDACPFTRSPGAVESIGDKADLLSTLCTLR
PPPELRLLLNRAIAALESYQSRKWRTRVDDERARRFLCGKTMMTWAARTQ
VRAWLAQNERFAAKFYSSQRLMKACRCIFRRKRFMKFQALSMRMAHIVFA
RRRATIALWRLSLLTRQRKFHADAKQVMFQSQRLRAVTRAMSLLHIPAAR
TLCYLHSYTRAHQLKSFQRAIRAWHKRAVARRLQRKAQEKVMARAQDERV
LGLKLQRWHRWMTCQQCQREAWRRGRSHFNSRLVRESLRFWARQAKLKVC
TSSMGRRRLLSRHLLAWAKTVSRQGELRAMELALACRHELLVQQRVFDKW
YASAWRQAQIRKACLAVAAEHHAHEMREILQQWRRNAKLQIYVKERLLAC
MYECLTSWMLSIQSKRMERCVWMEGKVHNEQQQKRWALRRWSARWRLNEK
KPDGN
back to top
Synonyms
Publications