Naga_100040g20, gene6449 (gene) Nannochloropsis gaditana

Overview
NameNaga_100040g20
Unique Namegene6449
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:221641..224309 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100040g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:221641..224309 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01040NO16G01040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6671rna6671-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6671rna6671Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6671

>rna6671-protein ID=rna6671-protein|Name=rna6671|organism=Nannochloropsis gaditana|type=polypeptide|length=839bp
MKSQIALLAVTFPPLLGVGAFVIPGKGRLPASVPISPIKTIFTIFTASKP
QLAPLQAKVDLFNRASLPSETGNNHSGGEASPSERVPEKEKLPGDFREAL
RNALWDLDDKIHEFLPYDEASAEVDPMYFVHAIQDRLNQIASSRKMASKT
PAKSSPAATHSSTSAVDRDVSLTSTTAVTSLQCSAQDVLSKTQAAATATQ
APVVEALQEGIKQVPPPPPATPSAVLSSPYEAEKASSASSSPSPGITPGE
GGSTTLMYREDTAAVKTRSKRWVEERVRLDRARPGGAPKPALESPPRTSA
PVAPSSRDVGAGNAGKRASQPRWRRDGDREEALRRREKVQIARQQRQQEL
QALAVAEASKPKKEAPASASVQGPFAAEDPPLKVSKPAMEATVAAEMAQV
LSQPRNVKRMTTRADRSRGVLVVDGVEDLTMPAATTTVQEAMRQAASQRP
KALIDTAEELRIGPLETTVSPRMVTPPSPTLTGAAEEDLNFMPPADRSSV
EHILLDSKTAAVEEWHRTRSLEQEMSLEDKVLAVESRLMDEIRAGPSEAI
LNYVTVLERIGEHQALPGKTSVSEGPQRWDLAYSSLPVSPFLSLPRFLAR
FLVNVAVKMEGGGKTVVFQAVFKFLEWFPRLRRTQTATVSVLTPRKSVEV
MNGRPRFRLGRLFTITQPRLRLPFIRNAKKATDSLAPPELTDTCTYMGAH
LKICRWTRSPGVSAEPLLAVFFRGHSPAKNQEWGVEEEGEGRCPNLAWPR
EWSEGKDCAEGGIKVKVLCNVRCVLYTYLVLRLTHWRKMEEVRWPFAAPG
VMHKWKRVRTCWLGYLSVLCRGCSEDFIGQEKKDWFLIP
back to top
Synonyms
Publications