Naga_100407g3, gene6312 (gene) Nannochloropsis gaditana

Overview
NameNaga_100407g3
Unique Namegene6312
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:740697..744785 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100407g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:740697..744785 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL029ngnoL029Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G02690NO17G02690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6534rna6534-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6534rna6534Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6534

>rna6534-protein ID=rna6534-protein|Name=rna6534|organism=Nannochloropsis gaditana|type=polypeptide|length=1362bp
MKGGGPGRGWAGSQGGWVGGRGGQRVEGEHSDSLGHGTLGVGGGPEGLPV
TGRLQQQPHESPPSYPQTALHKARALGRQPYSPPMETPDALWPSIPSSSD
FRSGTGPGIHTLGGESPGPSLVWPSGGSERPRSRLEEGPGHDEASRASPY
GGYGAGELGTPGRGVGNGLGSLGPNTSDGSTVLPESRQAPQHIHLNGGHS
GGNNGFLPPALRHFSMPQEGVPPHVHATPTLGPSARPVDARHVSSSSSGA
SPFLPASHVQPVVEWIAQFIQQKGGMITAANLGSALARLHPNFYALLKAS
HGGLTTFLSEYSHRFRFANDPPFNHIFLQEEGGEEGGRTAAQMPRMPSAP
ASSPWTLQGSMASSFSTGPKRGSGGDLGGEVAPGGRYGGEAPASVHPYPL
QSLQPPASARSSHPSQGVGVGGKDGALSDETLWRSFMSSPGLSAASSSPA
LPPRPGQGVMQRSLSGGAMPVFLSPNHPSFLPQPLTLHEQPQQAHHSAGM
LGGIAGLGPGKVVSSPSLHLLHQQQPPPSGLTYLASTQQQHHQSAALPPP
AGEPRFSGATLLPAHGSQARAMSKLGREGGCPPDQVLETDVVRATGEILR
NAANYALKAVELANTLRARLGTKVLAKVRERYGGLLFLLERHPSFFRVDR
IPKNDCVTLLQGGLMMASAAAPQQQHQVLEGAMPARPLGGGTPLMGGRAM
GGNDGARGGTMSASAYTQTIQQLQQQVALAREKEAFAAAKMRALSQQQHQ
QQHHQQQQQQRQQQPPHQQLQQQQHQQPPHQQQQQQQQQQQPPHHHQQQQ
QQQQQQQQQQQQQQQQQQQQPPHHHHQQQQQQPPPPQQQQHQQQHEQQQQ
PLDQQQYHRQHNQQHIQQQQQQQHQQQSQPQSFQQHQQQYQQQQHQQQWQ
QHAQQLPSNSLSSPFLPSSMENIQLMPEDRQVHEGREGGAEGGRGPTGDA
SLQRRHSWNSLMGMRQDENGDGRGALVVDGVGGGPPTGRPCLGPASASSA
SPPLLPPSLPLATACGAGNGEGGREGGTVGRNVFLPSAAHGAVTLAPFPA
EPGVGDKQSGASPGDGIVVAQHAWRPQEVFLREGDGTALQGEKSGGVEES
VGNGSGAVSPSSSVGATASRGPSRNNSDVNIWAMNNASCGALGSGGGRGE
EGKEDGAMRTLAAHPSDDSFLLFGRGTGGLDVGGQIWVGDGTRSKEEKAH
MPSGWGGGTGLEATGLARVGPTSSFSPSSSSSFLRAHPLQAASHSSSSDS
LSSHCSGSGGGGGRTLRAATLLGPYPLPRSLPHRLPSDGALRIRRDGHGG
AIPWRGRKVRGPANLDQQPFCPHPSLAVGTVAGCRLRDRGGGRTPGRGWH
HHRQQTPGPFET
back to top
Synonyms
Publications