Naga_100020g20, gene6239 (gene) Nannochloropsis gaditana

Overview
NameNaga_100020g20
Unique Namegene6239
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:546087..549694 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100020g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:546087..549694 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01810NO17G01810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6457rna6457-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6457rna6457Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6457

>rna6457-protein ID=rna6457-protein|Name=rna6457|organism=Nannochloropsis gaditana|type=polypeptide|length=964bp
METPPQTLPPSPPGNRHSPEPSRPQATSRIRRRSHSISGCGGAVIAEWWR
LMLLSSSAATAAAAATAAFIGSGGATPTSVGGAVPTAWWVSTQQQQQLNR
QSQLHNSWCAVSSTSRLATATGGWDSSAAPLRGRRGWDGMMGAPDKEEVL
LRAASPVRGMSEKPQARWQGEGPDARDEEGQDRAGNAGSSWMEALRLEKG
ALRRNHRFEVTIQKPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGD
RIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERTLAQDAGD
DSIASRQVEVFEVELERPVPLEWMQENAEGGVFVRRVLKADCEALRRIQP
YDRVVAVSASLGDRMWRTNSLDGVLSALCTRIGSKVRLQFERSPEVARLI
ARGAGNPGVGVADLVPPLPPRPSMAAASLLSPPSTADLVAKGEMLLMGEP
RVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMK
KQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVP
RHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAII
KAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQI
LRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLE
LYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYP
MAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSG
IHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMP
TPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNL
YVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKID
RELDARFYSNKNLV
back to top
Synonyms
Publications