Naga_100020g49, gene6212 (gene) Nannochloropsis gaditana

Overview
NameNaga_100020g49
Unique Namegene6212
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:492758..495680 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100020g49
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:492758..495680 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01540NO17G01540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6429rna6429-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6429rna6429Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6429

>rna6429-protein ID=rna6429-protein|Name=rna6429|organism=Nannochloropsis gaditana|type=polypeptide|length=862bp
MKHFVLNYLAFVLKTEIMRSPATPDHQDESHNFRTGKKEGLVRNVTSPTV
RLRCPSPRRKKISNKLLFKWSNRARCSEAATAFETMATPIKSPTQKNMSP
DSEVESHNFEPHHSEVWRIHERKRRQVEFIDPQSGRQRAFIRWMLTALLA
ILSEILCVVIIACTVELQALKFDTTLKIASHRKWYTSVAAFFLFLTFSLL
FAVVAGVVTLLQPAVGGSGMAEVKSYLNGVNLPHVMHFNTLYGKAVGVIF
AQASGLPLGFEGPIVSCCAILGSLFSQGKIWGLERRLSFEDFRNDKERRD
FVACATAGGVAAAFGAPIGGVFFALEEGASFMTLKLTWRCFFCAIGTALT
GYLLLSVLPPEFVNQLSFLDPFPNSGPLYEQKDLSIFAVMGVLGGLLGAA
FNQMNRRLTVFRLAHVTTPRKKMLELMSLTTLMAVLSFGLPFAGRCRSRP
QLDTTTGIYSYASTLRPFLCAGDDSYNELASLYLQSWDDSLRILFHLPMH
LQSGEPVFSTAALLCFFCPYFFMAFMTFGASVPFGLFIPSLLSGAALGRV
VGQALHPLGGFAEPGVYALVMASAVLGGMCRMTISLALILLEATGNMNLL
LPLSISLFLSRWVGNAFNESIYHMHIHLRKIPFLEPQCPQEARVSDLRVC
EIMATEPLCLHPVDQVGRIYELLAATAHHCFPLREDDCTVFGTISRDILC
SLLFLKAFSGEKSESVLRDTSAAVVTPVLPYEKVEQFFPHFPSIATICLT
ESEKFSWIDLRPYCDTAPYLVTESTAVPRAYRLFRNLGLRHLLVISRNGH
LSGILTRHDLEEEHLMASLAHSPMLLSRKVWKITKDALMRQEDGELDSYH
SHESPSVSPSMP
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Synonyms
Publications