Naga_100047g27, gene6168 (gene) Nannochloropsis gaditana

Overview
NameNaga_100047g27
Unique Namegene6168
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:396357..398358 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100047g27
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:396357..398358 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004518nuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL030ngnoL030Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01290NO17G01290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6384rna6384-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6384rna6384Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6384

>rna6384-protein ID=rna6384-protein|Name=rna6384|organism=Nannochloropsis gaditana|type=polypeptide|length=453bp
MVKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQI
TKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAE
EDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEAL
WRKMEEFRVSRGRRVILAGDLNLVADMKADMHEEFWSADGVDERTRHWLP
RLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSA
PSTGPRLLAAEILTNVLRTSKASDHVPVMVELELEHEKLGKEGSRNKVNN
ASDRKEGAGQRVEPLPEQKAVLAAFSPLPPSVKDAIEGRTIFRKILPDPK
QPSIKGFFASTRTPSVVSNTKGQSAGSVESSSGPEGAASKASLFPAATVT
EKLCTCEAECDSKRLAKNENVKEAMSIASNKKRQPLKSDKGQLSKYLKFS
PDL
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Synonyms
Publications