Naga_100047g25, gene6166 (gene) Nannochloropsis gaditana

Overview
NameNaga_100047g25
Unique Namegene6166
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:390699..392797 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100047g25
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:390699..392797 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL026ngnoL026Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G00530NO24G00530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6382rna6382-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6382rna6382Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6382

>rna6382-protein ID=rna6382-protein|Name=rna6382|organism=Nannochloropsis gaditana|type=polypeptide|length=262bp
MSGKDAVGVTKSGNPSAGTSAHAISDNSSPIVSTRRTGIIRIPDEGEGES
SDAPFLPVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKT
LHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGT
ESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASV
RVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVI
NELGIEKFKTNA
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Synonyms
Publications