Naga_100105g4, gene6140 (gene) Nannochloropsis gaditana

Overview
NameNaga_100105g4
Unique Namegene6140
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:326024..328882 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100105g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:326024..328882 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01270NO24G01270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6354rna6354-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6353rna6353-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6354rna6354Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6353rna6353Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6354

>rna6354-protein ID=rna6354-protein|Name=rna6354|organism=Nannochloropsis gaditana|type=polypeptide|length=583bp
MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFE
AWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVA
PYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPI
MDERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSP
GRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGEN
LQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGA
TSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDK
GSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLS
STPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANV
SASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDE
GVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADA
SVFPTIPSGNTHSTVLMVASRGAKFILDEFFGR
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protein sequence of rna6353

>rna6353-protein ID=rna6353-protein|Name=rna6353|organism=Nannochloropsis gaditana|type=polypeptide|length=756bp
MVLRGGYQRIGEGKEDLPVVHEDEEDNVSMVPPAAVARSGIAHATAQRGG
VVTALLEHRPFLYGYSLLLLTFSVAALVYVLQGQPPPAPNSPSSLPFGES
SASVATAGHDGARPTPTLRLEGYDFIVVGGGPAGSVLANKLSEDPAVEVL
LLEAGGASQGCLGGTDYTASPLTMFDVPLLWSTVAHQADYHWDVEGAMIA
KVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGP
PSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGA
AYYHFCIKNGVRMSAARAFLGPIMDERSNLDIVLKAEVTHVLMSGEKDGV
YTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGV
GPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGS
FEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGS
QQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHL
VQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQA
RYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVI
ARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEE
DPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFIL
DEFFGR
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Synonyms
Publications