Naga_100246g4, gene6110 (gene) Nannochloropsis gaditana

Overview
NameNaga_100246g4
Unique Namegene6110
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:242327..245284 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100246g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:242327..245284 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0005975carbohydrate metabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01620NO24G01620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6321rna6321-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6321rna6321Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6321

>rna6321-protein ID=rna6321-protein|Name=rna6321|organism=Nannochloropsis gaditana|type=polypeptide|length=719bp
MHAQVSSVLVRRGSRHAWASTVIKMTSSFSGNFAQKNSSRQRYPQQNVVG
RYASRAAYMSPGSSSSSSSSSSFMRWGWGLAAATAALGALSERQDSPTEA
CGIVGVIGEDDARSILMEGLTVLQNRGYDSAGIATISPHDNVLTVTKYAS
AGSTYDCIDLVKENSHRHKGHHVGIAHTRWATHGGKTDLNAHPHTDSKGR
VAVVHNGTITNSHELRHELQHAHGIKFVSETDTEIIAQLIGLGLDENLSL
KDATAEALKRCDGTWGLVVLAPKEPDELVVACNGSPMVLGIGEGRVFIAS
ETSAFNRHTKNFIALKDGELGVVRADGSTLDLTRVQKAPDVNILLSPAPY
PHWTIRECMEQPEAIARALGFGGRMSDTRVYLGGLDRQKERMQSIKHLVL
TGCGTSLHAAMYAAKLMRDFEAFRTVMAVDAAEVRLSDLPKHHAGLLAIS
QSGETKDVHRAVVLADRMGLPTMSVVNTVGSLIARTTKLGVYLNAGRESS
VASTKAFTTQVTVLTLITAWFRQVREEAGEEALPGRVTELLEALQRMPIG
FGMARRTREQCAELAVRLKDKEHVFLLGKGYGEPIALEGALKLKEMAYIH
AEGYSGGALKHGPFALIEGKEGKFGATPIICLILDDEHAQHMRTAAEEVK
ARGADLIVITDNPKLARGLVPDPIIVPNNGPLTALIATLPLQLLAYELAV
LRGINPDKPRNLAKAVTVD
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Synonyms
Publications