Naga_102571g1, gene5980 (gene) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	Naga_102571g1
Unique Name	gene5980
Type	gene
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002467.1:805093..805840 -

Link to JBrowse

Properties


Property Name	Value
Locus tag	Naga_102571g1
Gene biotype	protein_coding
Gbkey	Gene

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002467.1	supercontig	CM002467.1:805093..805840 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
SRP229557	2021-06-30
PRJNA174770	2019-07-03
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ngnoL023	ngnoL023	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G03080	NO14G03080	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
rna6190	rna6190-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
rna6190	rna6190	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of rna6190

>rna6190-protein ID=rna6190-protein|Name=rna6190|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MLRPHPPHSFSYVSLPPPCHLPFPLFPPSLPPSLPPSLPPSLPTQAAQSL
RDLPSAPPAVKLLEEYFRIAPNNPEFRGRFKAMAQVCHCPPLLPLMFSLA
SSFPCLGSVCLKGSDQR

Synonyms

Publications