Naga_100427g1, gene5948 (gene) Nannochloropsis gaditana

Overview
NameNaga_100427g1
Unique Namegene5948
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:733818..735187 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100427g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:733818..735187 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding
GO:0003677DNA binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6157rna6157-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6157rna6157Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6157

>rna6157-protein ID=rna6157-protein|Name=rna6157|organism=Nannochloropsis gaditana|type=polypeptide|length=408bp
MDFDSDRVTVVNTNPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSD
FLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKG
AREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQ
LAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSG
IQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKL
QESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARG
TAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQ
KLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLPGEEGRREGSRRGGRQ
GVRCRDLA
back to top
Synonyms
Publications